JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:26 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1kjqa1.name2015-04-17 16:00 0 Job name flag file
[ ]jp_eaZE1NB.align2015-04-17 16:25 108KPSIBLAST alignment in FASTA format
[TXT]jp_eaZE1NB.als2015-04-17 16:25 2.2KAlscript command file for PS/PDF output
[ ]jp_eaZE1NB.blast.gz2015-04-17 16:24 277KCompressed PSIBLAST output file
[TXT]jp_eaZE1NB.coils.csv2015-04-17 16:25 474 COILS output in CSV format
[ ]jp_eaZE1NB.coilseq.lupas_142015-04-17 16:25 3.1KCOILS output, window length 14
[ ]jp_eaZE1NB.coilseq.lupas_212015-04-17 16:25 3.1KCOILS output, window length 21
[ ]jp_eaZE1NB.coilseq.lupas_282015-04-17 16:25 3.1KCOILS output, window length 28
[ ]jp_eaZE1NB.concise2015-04-17 16:25 203KPrediction: coiled-coil, solvent, alignment
[ ]jp_eaZE1NB.concise.blc2015-04-17 16:25 107KBLC format prediction and alignment data
[ ]jp_eaZE1NB.concise.fasta2015-04-17 16:25 108KPrediction: coiled-coil, solvent, alignment
[ ]jp_eaZE1NB.concise.pdf2015-04-17 16:26 623KPDF prediction and alignment data
[ ]jp_eaZE1NB.concise.ps2015-04-17 16:25 11MPrediction: coiled-coil, solvent, alignment
[ ]jp_eaZE1NB.fasta2015-04-17 16:18 88 Input query sequence in FASTA format
[ ]jp_eaZE1NB.full_MSA.fasta2015-04-17 16:24 585KFull MSA before JPred filters in FASTA
[TXT]jp_eaZE1NB.full_MSA.fasta.noGaps.html2015-04-17 16:26 337KFull MSA before JPred filters in FASTA
[TXT]jp_eaZE1NB.full_MSA.fasta.withGaps.html2015-04-17 16:26 2.6MFull MSA before JPred filters in FASTA
[ ]jp_eaZE1NB.hmm2015-04-17 16:25 14KHHMer2 profile of the alignment
[TXT]jp_eaZE1NB.html2015-04-17 16:25 339KHTML prediction and alignment data
[ ]jp_eaZE1NB.input2015-04-17 16:00 81 Raw input data for analysis
[ ]jp_eaZE1NB.jalview2015-04-17 16:25 2.3KJalview annotation file for alignment
[ ]jp_eaZE1NB.jnet2015-04-17 16:25 2.8KJnet secondary structure output
[TXT]jp_eaZE1NB.profile2015-04-17 16:21 12KPSIBLAST profile from alignment
[ ]jp_eaZE1NB.pssm2015-04-17 16:25 16KPSIBLAST PSSM for Jnet
[TXT]jp_eaZE1NB.results.html2016-02-15 12:17 41KJPred results page
[TXT]jp_eaZE1NB.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_eaZE1NB.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_eaZE1NB.seq2015-04-17 16:00 88 Sequence data file
[TXT]jp_eaZE1NB.simple.html2015-04-17 16:25 1.1KBrief HTML: sequence and prediction only
[TXT]jp_eaZE1NB.svg.html2015-04-17 16:26 33KJalview SVG summary of results
[ ]jp_eaZE1NB.tar.gz2015-04-17 16:26 1.3MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.