JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:36 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1l3ka1.name2015-04-17 15:24 0 Job name flag file
[ ]jp_fSEojL9.align2015-04-17 16:35 65KPSIBLAST alignment in FASTA format
[TXT]jp_fSEojL9.als2015-04-17 16:35 2.1KAlscript command file for PS/PDF output
[ ]jp_fSEojL9.blast.gz2015-04-17 16:32 10MCompressed PSIBLAST output file
[TXT]jp_fSEojL9.coils.csv2015-04-17 16:35 534 COILS output in CSV format
[ ]jp_fSEojL9.coilseq.lupas_142015-04-17 16:35 3.5KCOILS output, window length 14
[ ]jp_fSEojL9.coilseq.lupas_212015-04-17 16:35 3.5KCOILS output, window length 21
[ ]jp_fSEojL9.coilseq.lupas_282015-04-17 16:35 3.5KCOILS output, window length 28
[ ]jp_fSEojL9.concise2015-04-17 16:35 125KPrediction: coiled-coil, solvent, alignment
[ ]jp_fSEojL9.concise.blc2015-04-17 16:35 65KBLC format prediction and alignment data
[ ]jp_fSEojL9.concise.fasta2015-04-17 16:35 66KPrediction: coiled-coil, solvent, alignment
[ ]jp_fSEojL9.concise.pdf2015-04-17 16:35 398KPDF prediction and alignment data
[ ]jp_fSEojL9.concise.ps2015-04-17 16:35 7.0MPrediction: coiled-coil, solvent, alignment
[ ]jp_fSEojL9.fasta2015-04-17 15:24 98 Input query sequence in FASTA format
[ ]jp_fSEojL9.full_MSA.fasta2015-04-17 16:34 25MFull MSA before JPred filters in FASTA
[TXT]jp_fSEojL9.full_MSA.fasta.noGaps.html2015-04-17 16:36 3.6MFull MSA before JPred filters in FASTA
[TXT]jp_fSEojL9.full_MSA.fasta.withGaps.html2015-04-17 16:36 59MFull MSA before JPred filters in FASTA
[ ]jp_fSEojL9.hmm2015-04-17 16:35 16KHHMer2 profile of the alignment
[TXT]jp_fSEojL9.html2015-04-17 16:35 196KHTML prediction and alignment data
[ ]jp_fSEojL9.input2015-04-17 15:24 91 Raw input data for analysis
[ ]jp_fSEojL9.jalview2015-04-17 16:35 2.5KJalview annotation file for alignment
[ ]jp_fSEojL9.jnet2015-04-17 16:35 3.1KJnet secondary structure output
[TXT]jp_fSEojL9.profile2015-04-17 16:14 14KPSIBLAST profile from alignment
[ ]jp_fSEojL9.pssm2015-04-17 16:35 18KPSIBLAST PSSM for Jnet
[TXT]jp_fSEojL9.results.html2016-02-15 12:17 44KJPred results page
[TXT]jp_fSEojL9.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_fSEojL9.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_fSEojL9.seq2015-04-17 15:24 98 Sequence data file
[TXT]jp_fSEojL9.simple.html2015-04-17 16:35 1.2KBrief HTML: sequence and prediction only
[TXT]jp_fSEojL9.svg.html2015-04-17 16:36 36KJalview SVG summary of results
[ ]jp_fSEojL9.tar.gz2015-04-17 16:36 16MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.