JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:17 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1lc0a2.name2015-04-17 15:56 0 Job name flag file
[ ]jp_RjpIlYx.align2015-04-17 16:17 3.8KPSIBLAST alignment in FASTA format
[TXT]jp_RjpIlYx.als2015-04-17 16:17 2.6KAlscript command file for PS/PDF output
[ ]jp_RjpIlYx.blast.gz2015-04-17 16:17 10KCompressed PSIBLAST output file
[TXT]jp_RjpIlYx.coils.csv2015-04-17 16:17 738 COILS output in CSV format
[ ]jp_RjpIlYx.coilseq.lupas_142015-04-17 16:17 5.0KCOILS output, window length 14
[ ]jp_RjpIlYx.coilseq.lupas_212015-04-17 16:17 5.0KCOILS output, window length 21
[ ]jp_RjpIlYx.coilseq.lupas_282015-04-17 16:17 5.0KCOILS output, window length 28
[ ]jp_RjpIlYx.concise2015-04-17 16:17 12KPrediction: coiled-coil, solvent, alignment
[ ]jp_RjpIlYx.concise.blc2015-04-17 16:17 5.6KBLC format prediction and alignment data
[ ]jp_RjpIlYx.concise.fasta2015-04-17 16:17 5.1KPrediction: coiled-coil, solvent, alignment
[ ]jp_RjpIlYx.concise.pdf2015-04-17 16:17 35KPDF prediction and alignment data
[ ]jp_RjpIlYx.concise.ps2015-04-17 16:17 633KPrediction: coiled-coil, solvent, alignment
[ ]jp_RjpIlYx.fasta2015-04-17 16:15 132 Input query sequence in FASTA format
[ ]jp_RjpIlYx.full_MSA.fasta2015-04-17 16:17 13KFull MSA before JPred filters in FASTA
[TXT]jp_RjpIlYx.full_MSA.fasta.noGaps.html2015-04-17 16:17 18KFull MSA before JPred filters in FASTA
[TXT]jp_RjpIlYx.full_MSA.fasta.withGaps.html2015-04-17 16:17 34KFull MSA before JPred filters in FASTA
[ ]jp_RjpIlYx.hmm2015-04-17 16:17 22KHHMer2 profile of the alignment
[TXT]jp_RjpIlYx.html2015-04-17 16:17 20KHTML prediction and alignment data
[ ]jp_RjpIlYx.input2015-04-17 15:56 125 Raw input data for analysis
[ ]jp_RjpIlYx.jalview2015-04-17 16:17 3.2KJalview annotation file for alignment
[ ]jp_RjpIlYx.jnet2015-04-17 16:17 4.4KJnet secondary structure output
[TXT]jp_RjpIlYx.profile2015-04-17 16:16 19KPSIBLAST profile from alignment
[ ]jp_RjpIlYx.pssm2015-04-17 16:17 25KPSIBLAST PSSM for Jnet
[TXT]jp_RjpIlYx.results.html2016-02-15 12:17 58KJPred results page
[TXT]jp_RjpIlYx.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_RjpIlYx.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_RjpIlYx.seq2015-04-17 15:56 132 Sequence data file
[TXT]jp_RjpIlYx.simple.html2015-04-17 16:17 1.3KBrief HTML: sequence and prediction only
[TXT]jp_RjpIlYx.svg.html2015-04-17 16:17 50KJalview SVG summary of results
[ ]jp_RjpIlYx.tar.gz2015-04-17 16:17 88KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.