JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:24 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1m1eb_.name2015-04-17 19:05 0 Job name flag file
[ ]jp_tksReAn.align2015-04-17 21:24 3.1KPSIBLAST alignment in FASTA format
[TXT]jp_tksReAn.als2015-04-17 21:24 1.6KAlscript command file for PS/PDF output
[ ]jp_tksReAn.blast.gz2015-04-17 21:24 13KCompressed PSIBLAST output file
[TXT]jp_tksReAn.coils.csv2015-04-17 21:24 420 COILS output in CSV format
[ ]jp_tksReAn.coilseq.lupas_142015-04-17 21:24 2.7KCOILS output, window length 14
[ ]jp_tksReAn.coilseq.lupas_212015-04-17 21:24 2.7KCOILS output, window length 21
[ ]jp_tksReAn.coilseq.lupas_282015-04-17 21:24 2.7KCOILS output, window length 28
[ ]jp_tksReAn.concise2015-04-17 21:24 8.7KPrediction: coiled-coil, solvent, alignment
[ ]jp_tksReAn.concise.blc2015-04-17 21:24 4.1KBLC format prediction and alignment data
[ ]jp_tksReAn.concise.fasta2015-04-17 21:24 3.9KPrediction: coiled-coil, solvent, alignment
[ ]jp_tksReAn.concise.pdf2015-04-17 21:24 27KPDF prediction and alignment data
[ ]jp_tksReAn.concise.ps2015-04-17 21:24 453KPrediction: coiled-coil, solvent, alignment
[ ]jp_tksReAn.fasta2015-04-17 21:22 78 Input query sequence in FASTA format
[ ]jp_tksReAn.full_MSA.fasta2015-04-17 21:24 11KFull MSA before JPred filters in FASTA
[TXT]jp_tksReAn.full_MSA.fasta.noGaps.html2015-04-17 21:24 19KFull MSA before JPred filters in FASTA
[TXT]jp_tksReAn.full_MSA.fasta.withGaps.html2015-04-17 21:24 43KFull MSA before JPred filters in FASTA
[ ]jp_tksReAn.hmm2015-04-17 21:24 12KHHMer2 profile of the alignment
[TXT]jp_tksReAn.html2015-04-17 21:24 18KHTML prediction and alignment data
[ ]jp_tksReAn.input2015-04-17 19:05 72 Raw input data for analysis
[ ]jp_tksReAn.jalview2015-04-17 21:24 2.1KJalview annotation file for alignment
[ ]jp_tksReAn.jnet2015-04-17 21:24 2.5KJnet secondary structure output
[TXT]jp_tksReAn.profile2015-04-17 21:23 11KPSIBLAST profile from alignment
[ ]jp_tksReAn.pssm2015-04-17 21:24 14KPSIBLAST PSSM for Jnet
[TXT]jp_tksReAn.results.html2016-02-15 12:17 37KJPred results page
[TXT]jp_tksReAn.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_tksReAn.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_tksReAn.seq2015-04-17 19:05 78 Sequence data file
[TXT]jp_tksReAn.simple.html2015-04-17 21:24 1.0KBrief HTML: sequence and prediction only
[TXT]jp_tksReAn.svg.html2015-04-17 21:24 29KJalview SVG summary of results
[ ]jp_tksReAn.tar.gz2015-04-17 21:24 71KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.