JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:35 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1mf7a_.name2015-04-17 19:06 0 Job name flag file
[ ]jp_tZhLQPp.align2015-04-17 21:34 140KPSIBLAST alignment in FASTA format
[TXT]jp_tZhLQPp.als2015-04-17 21:34 3.2KAlscript command file for PS/PDF output
[ ]jp_tZhLQPp.blast.gz2015-04-17 21:32 12MCompressed PSIBLAST output file
[TXT]jp_tZhLQPp.coils.csv2015-04-17 21:34 1.2KCOILS output in CSV format
[ ]jp_tZhLQPp.coilseq.lupas_142015-04-17 21:34 8.1KCOILS output, window length 14
[ ]jp_tZhLQPp.coilseq.lupas_212015-04-17 21:34 8.1KCOILS output, window length 21
[ ]jp_tZhLQPp.coilseq.lupas_282015-04-17 21:34 8.1KCOILS output, window length 28
[ ]jp_tZhLQPp.concise2015-04-17 21:34 278KPrediction: coiled-coil, solvent, alignment
[ ]jp_tZhLQPp.concise.blc2015-04-17 21:34 141KBLC format prediction and alignment data
[ ]jp_tZhLQPp.concise.fasta2015-04-17 21:34 142KPrediction: coiled-coil, solvent, alignment
[ ]jp_tZhLQPp.concise.pdf2015-04-17 21:34 1.0MPDF prediction and alignment data
[ ]jp_tZhLQPp.concise.ps2015-04-17 21:34 17MPrediction: coiled-coil, solvent, alignment
[ ]jp_tZhLQPp.fasta2015-04-17 21:24 209 Input query sequence in FASTA format
[ ]jp_tZhLQPp.full_MSA.fasta2015-04-17 21:33 14MFull MSA before JPred filters in FASTA
[TXT]jp_tZhLQPp.full_MSA.fasta.noGaps.html2015-04-17 21:34 2.5MFull MSA before JPred filters in FASTA
[TXT]jp_tZhLQPp.full_MSA.fasta.withGaps.html2015-04-17 21:34 50MFull MSA before JPred filters in FASTA
[ ]jp_tZhLQPp.hmm2015-04-17 21:34 36KHHMer2 profile of the alignment
[TXT]jp_tZhLQPp.html2015-04-17 21:34 285KHTML prediction and alignment data
[ ]jp_tZhLQPp.input2015-04-17 19:06 201 Raw input data for analysis
[ ]jp_tZhLQPp.jalview2015-04-17 21:34 4.7KJalview annotation file for alignment
[ ]jp_tZhLQPp.jnet2015-04-17 21:34 7.1KJnet secondary structure output
[TXT]jp_tZhLQPp.profile2015-04-17 21:30 31KPSIBLAST profile from alignment
[ ]jp_tZhLQPp.pssm2015-04-17 21:34 42KPSIBLAST PSSM for Jnet
[TXT]jp_tZhLQPp.results.html2016-02-15 12:17 87KJPred results page
[TXT]jp_tZhLQPp.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_tZhLQPp.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_tZhLQPp.seq2015-04-17 19:06 209 Sequence data file
[TXT]jp_tZhLQPp.simple.html2015-04-17 21:34 1.6KBrief HTML: sequence and prediction only
[TXT]jp_tZhLQPp.svg.html2015-04-17 21:35 79KJalview SVG summary of results
[ ]jp_tZhLQPp.tar.gz2015-04-17 21:35 18MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.