JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[ ]jp_kCg2DVC.tar.gz2015-04-17 21:28 3.6MArchive containing complete results
[TXT]jp_kCg2DVC.svg.html2015-04-17 21:28 34KJalview SVG summary of results
[TXT]jp_kCg2DVC.simple.html2015-04-17 21:28 1.1KBrief HTML: sequence and prediction only
[ ]jp_kCg2DVC.seq2015-04-17 19:06 93 Sequence data file
[TXT]jp_kCg2DVC.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[TXT]jp_kCg2DVC.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_kCg2DVC.results.html2016-02-15 12:17 42KJPred results page
[ ]jp_kCg2DVC.pssm2015-04-17 21:28 17KPSIBLAST PSSM for Jnet
[TXT]jp_kCg2DVC.profile2015-04-17 21:26 13KPSIBLAST profile from alignment
[ ]jp_kCg2DVC.jnet2015-04-17 21:28 3.0KJnet secondary structure output
[ ]jp_kCg2DVC.jalview2015-04-17 21:28 2.4KJalview annotation file for alignment
[ ]jp_kCg2DVC.input2015-04-17 19:06 86 Raw input data for analysis
[TXT]jp_kCg2DVC.html2015-04-17 21:28 219KHTML prediction and alignment data
[ ]jp_kCg2DVC.hmm2015-04-17 21:28 15KHHMer2 profile of the alignment
[TXT]jp_kCg2DVC.full_MSA.fasta.withGaps.html2015-04-17 21:28 14MFull MSA before JPred filters in FASTA
[TXT]jp_kCg2DVC.full_MSA.fasta.noGaps.html2015-04-17 21:28 1.1MFull MSA before JPred filters in FASTA
[ ]jp_kCg2DVC.full_MSA.fasta2015-04-17 21:27 4.1MFull MSA before JPred filters in FASTA
[ ]jp_kCg2DVC.fasta2015-04-17 21:25 93 Input query sequence in FASTA format
[ ]jp_kCg2DVC.concise.ps2015-04-17 21:28 7.6MPrediction: coiled-coil, solvent, alignment
[ ]jp_kCg2DVC.concise.pdf2015-04-17 21:28 438KPDF prediction and alignment data
[ ]jp_kCg2DVC.concise.fasta2015-04-17 21:28 72KPrediction: coiled-coil, solvent, alignment
[ ]jp_kCg2DVC.concise.blc2015-04-17 21:28 71KBLC format prediction and alignment data
[ ]jp_kCg2DVC.concise2015-04-17 21:28 136KPrediction: coiled-coil, solvent, alignment
[ ]jp_kCg2DVC.coilseq.lupas_282015-04-17 21:28 3.3KCOILS output, window length 28
[ ]jp_kCg2DVC.coilseq.lupas_212015-04-17 21:28 3.3KCOILS output, window length 21
[ ]jp_kCg2DVC.coilseq.lupas_142015-04-17 21:28 3.3KCOILS output, window length 14
[TXT]jp_kCg2DVC.coils.csv2015-04-17 21:28 504 COILS output in CSV format
[ ]jp_kCg2DVC.blast.gz2015-04-17 21:27 1.8MCompressed PSIBLAST output file
[TXT]jp_kCg2DVC.als2015-04-17 21:28 1.9KAlscript command file for PS/PDF output
[ ]jp_kCg2DVC.align2015-04-17 21:28 71KPSIBLAST alignment in FASTA format
[TXT]d1mj4a_.name2015-04-17 19:06 0 Job name flag file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]LOG2015-04-17 21:28 4.7KJPred server log file
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.