JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:32 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1mkya3.name2015-04-17 19:06 0 Job name flag file
[ ]jp_YSK9Sbs.align2015-04-17 21:31 72KPSIBLAST alignment in FASTA format
[TXT]jp_YSK9Sbs.als2015-04-17 21:32 1.9KAlscript command file for PS/PDF output
[ ]jp_YSK9Sbs.blast.gz2015-04-17 21:30 604KCompressed PSIBLAST output file
[TXT]jp_YSK9Sbs.coils.csv2015-04-17 21:31 516 COILS output in CSV format
[ ]jp_YSK9Sbs.coilseq.lupas_142015-04-17 21:31 3.4KCOILS output, window length 14
[ ]jp_YSK9Sbs.coilseq.lupas_212015-04-17 21:31 3.4KCOILS output, window length 21
[ ]jp_YSK9Sbs.coilseq.lupas_282015-04-17 21:31 3.4KCOILS output, window length 28
[ ]jp_YSK9Sbs.concise2015-04-17 21:31 139KPrediction: coiled-coil, solvent, alignment
[ ]jp_YSK9Sbs.concise.blc2015-04-17 21:32 72KBLC format prediction and alignment data
[ ]jp_YSK9Sbs.concise.fasta2015-04-17 21:32 73KPrediction: coiled-coil, solvent, alignment
[ ]jp_YSK9Sbs.concise.pdf2015-04-17 21:32 469KPDF prediction and alignment data
[ ]jp_YSK9Sbs.concise.ps2015-04-17 21:32 8.0MPrediction: coiled-coil, solvent, alignment
[ ]jp_YSK9Sbs.fasta2015-04-17 21:25 95 Input query sequence in FASTA format
[ ]jp_YSK9Sbs.full_MSA.fasta2015-04-17 21:31 842KFull MSA before JPred filters in FASTA
[TXT]jp_YSK9Sbs.full_MSA.fasta.noGaps.html2015-04-17 21:32 619KFull MSA before JPred filters in FASTA
[TXT]jp_YSK9Sbs.full_MSA.fasta.withGaps.html2015-04-17 21:32 4.1MFull MSA before JPred filters in FASTA
[ ]jp_YSK9Sbs.hmm2015-04-17 21:31 15KHHMer2 profile of the alignment
[TXT]jp_YSK9Sbs.html2015-04-17 21:31 222KHTML prediction and alignment data
[ ]jp_YSK9Sbs.input2015-04-17 19:06 88 Raw input data for analysis
[ ]jp_YSK9Sbs.jalview2015-04-17 21:32 2.5KJalview annotation file for alignment
[ ]jp_YSK9Sbs.jnet2015-04-17 21:31 3.0KJnet secondary structure output
[TXT]jp_YSK9Sbs.profile2015-04-17 21:30 13KPSIBLAST profile from alignment
[ ]jp_YSK9Sbs.pssm2015-04-17 21:31 17KPSIBLAST PSSM for Jnet
[TXT]jp_YSK9Sbs.results.html2016-02-15 12:17 42KJPred results page
[TXT]jp_YSK9Sbs.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_YSK9Sbs.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_YSK9Sbs.seq2015-04-17 19:06 95 Sequence data file
[TXT]jp_YSK9Sbs.simple.html2015-04-17 21:31 1.1KBrief HTML: sequence and prediction only
[TXT]jp_YSK9Sbs.svg.html2015-04-17 21:32 34KJalview SVG summary of results
[ ]jp_YSK9Sbs.tar.gz2015-04-17 21:32 1.6MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.