JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:26 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1mvfd_.name2015-04-17 16:02 0 Job name flag file
[ ]jp_IwQihS5.align2015-04-17 16:25 40KPSIBLAST alignment in FASTA format
[TXT]jp_IwQihS5.als2015-04-17 16:25 1.8KAlscript command file for PS/PDF output
[ ]jp_IwQihS5.blast.gz2015-04-17 16:25 81KCompressed PSIBLAST output file
[TXT]jp_IwQihS5.coils.csv2015-04-17 16:25 294 COILS output in CSV format
[ ]jp_IwQihS5.coilseq.lupas_142015-04-17 16:25 1.8KCOILS output, window length 14
[ ]jp_IwQihS5.coilseq.lupas_212015-04-17 16:25 1.8KCOILS output, window length 21
[ ]jp_IwQihS5.coilseq.lupas_282015-04-17 16:25 1.8KCOILS output, window length 28
[ ]jp_IwQihS5.concise2015-04-17 16:25 75KPrediction: coiled-coil, solvent, alignment
[ ]jp_IwQihS5.concise.blc2015-04-17 16:25 41KBLC format prediction and alignment data
[ ]jp_IwQihS5.concise.fasta2015-04-17 16:25 41KPrediction: coiled-coil, solvent, alignment
[ ]jp_IwQihS5.concise.pdf2015-04-17 16:25 244KPDF prediction and alignment data
[ ]jp_IwQihS5.concise.ps2015-04-17 16:25 4.0MPrediction: coiled-coil, solvent, alignment
[ ]jp_IwQihS5.fasta2015-04-17 16:21 57 Input query sequence in FASTA format
[ ]jp_IwQihS5.full_MSA.fasta2015-04-17 16:25 95KFull MSA before JPred filters in FASTA
[TXT]jp_IwQihS5.full_MSA.fasta.noGaps.html2015-04-17 16:25 162KFull MSA before JPred filters in FASTA
[TXT]jp_IwQihS5.full_MSA.fasta.withGaps.html2015-04-17 16:25 649KFull MSA before JPred filters in FASTA
[ ]jp_IwQihS5.hmm2015-04-17 16:25 8.3KHHMer2 profile of the alignment
[TXT]jp_IwQihS5.html2015-04-17 16:25 172KHTML prediction and alignment data
[ ]jp_IwQihS5.input2015-04-17 16:02 51 Raw input data for analysis
[ ]jp_IwQihS5.jalview2015-04-17 16:25 1.7KJalview annotation file for alignment
[ ]jp_IwQihS5.jnet2015-04-17 16:25 1.7KJnet secondary structure output
[TXT]jp_IwQihS5.profile2015-04-17 16:25 7.5KPSIBLAST profile from alignment
[ ]jp_IwQihS5.pssm2015-04-17 16:25 9.5KPSIBLAST PSSM for Jnet
[TXT]jp_IwQihS5.results.html2016-02-15 12:17 29KJPred results page
[TXT]jp_IwQihS5.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_IwQihS5.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_IwQihS5.seq2015-04-17 16:02 57 Sequence data file
[TXT]jp_IwQihS5.simple.html2015-04-17 16:25 1.0KBrief HTML: sequence and prediction only
[TXT]jp_IwQihS5.svg.html2015-04-17 16:26 21KJalview SVG summary of results
[ ]jp_IwQihS5.tar.gz2015-04-17 16:26 480KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.