JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]jp_MSrlyqK.als2015-04-17 16:23 2.8KAlscript command file for PS/PDF output
[ ]jp_MSrlyqK.tar.gz2015-04-17 16:23 45KArchive containing complete results
[ ]jp_MSrlyqK.concise.blc2015-04-17 16:23 2.8KBLC format prediction and alignment data
[TXT]jp_MSrlyqK.simple.html2015-04-17 16:23 1.5KBrief HTML: sequence and prediction only
[TXT]jp_MSrlyqK.coils.csv2015-04-17 16:23 1.0KCOILS output in CSV format
[ ]jp_MSrlyqK.coilseq.lupas_142015-04-17 16:23 6.8KCOILS output, window length 14
[ ]jp_MSrlyqK.coilseq.lupas_212015-04-17 16:23 6.8KCOILS output, window length 21
[ ]jp_MSrlyqK.coilseq.lupas_282015-04-17 16:23 6.8KCOILS output, window length 28
[ ]jp_MSrlyqK.blast.gz2015-04-17 16:23 1.7KCompressed PSIBLAST output file
[ ]jp_MSrlyqK.full_MSA.fasta2015-04-17 16:23 354 Full MSA before JPred filters in FASTA
[TXT]jp_MSrlyqK.full_MSA.fasta.noGaps.html2015-04-17 16:23 576 Full MSA before JPred filters in FASTA
[TXT]jp_MSrlyqK.full_MSA.fasta.withGaps.html2015-04-17 16:23 576 Full MSA before JPred filters in FASTA
[ ]jp_MSrlyqK.hmm2015-04-17 16:23 30KHHMer2 profile of the alignment
[TXT]jp_MSrlyqK.html2015-04-17 16:23 17KHTML prediction and alignment data
[TXT]jp_MSrlyqK.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_MSrlyqK.fasta2015-04-17 16:21 177 Input query sequence in FASTA format
[TXT]jp_MSrlyqK.results.html2016-02-15 12:17 75KJPred results page
[TXT]LOG2015-04-17 16:23 4.8KJPred server log file
[TXT]jp_MSrlyqK.svg.html2015-04-17 16:23 67KJalview SVG summary of results
[ ]jp_MSrlyqK.jalview2015-04-17 16:23 4.1KJalview annotation file for alignment
[TXT]jp_MSrlyqK.results_jalview.html2016-02-24 17:17 13KJalview results options
[ ]jp_MSrlyqK.jnet2015-04-17 16:23 6.0KJnet secondary structure output
[TXT]d1mw5a_.name2015-04-17 16:02 0 Job name flag file
[ ]jp_MSrlyqK.concise.pdf2015-04-17 16:23 19KPDF prediction and alignment data
[ ]jp_MSrlyqK.pssm2015-04-17 16:23 35KPSIBLAST PSSM for Jnet
[ ]jp_MSrlyqK.align2015-04-17 16:23 354 PSIBLAST alignment in FASTA format
[TXT]jp_MSrlyqK.profile2015-04-17 16:22 26KPSIBLAST profile from alignment
[ ]jp_MSrlyqK.concise2015-04-17 16:23 7.6KPrediction: coiled-coil, solvent, alignment
[ ]jp_MSrlyqK.concise.fasta2015-04-17 16:23 2.1KPrediction: coiled-coil, solvent, alignment
[ ]jp_MSrlyqK.concise.ps2015-04-17 16:23 329KPrediction: coiled-coil, solvent, alignment
[ ]jp_MSrlyqK.input2015-04-17 16:02 169 Raw input data for analysis
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[ ]jp_MSrlyqK.seq2015-04-17 16:02 177 Sequence data file
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.