JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:55 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1n7za_.name2015-04-17 18:28 0 Job name flag file
[ ]jp_mc_NMUc.align2015-04-17 20:55 9.9KPSIBLAST alignment in FASTA format
[TXT]jp_mc_NMUc.als2015-04-17 20:55 4.6KAlscript command file for PS/PDF output
[ ]jp_mc_NMUc.blast.gz2015-04-17 20:55 25KCompressed PSIBLAST output file
[TXT]jp_mc_NMUc.coils.csv2015-04-17 20:55 2.0KCOILS output in CSV format
[ ]jp_mc_NMUc.coilseq.lupas_142015-04-17 20:55 14KCOILS output, window length 14
[ ]jp_mc_NMUc.coilseq.lupas_212015-04-17 20:55 14KCOILS output, window length 21
[ ]jp_mc_NMUc.coilseq.lupas_282015-04-17 20:55 14KCOILS output, window length 28
[ ]jp_mc_NMUc.concise2015-04-17 20:55 33KPrediction: coiled-coil, solvent, alignment
[ ]jp_mc_NMUc.concise.blc2015-04-17 20:55 15KBLC format prediction and alignment data
[ ]jp_mc_NMUc.concise.fasta2015-04-17 20:55 13KPrediction: coiled-coil, solvent, alignment
[ ]jp_mc_NMUc.concise.pdf2015-04-17 20:55 87KPDF prediction and alignment data
[ ]jp_mc_NMUc.concise.ps2015-04-17 20:55 1.7MPrediction: coiled-coil, solvent, alignment
[ ]jp_mc_NMUc.fasta2015-04-17 20:21 345 Input query sequence in FASTA format
[ ]jp_mc_NMUc.full_MSA.fasta2015-04-17 20:55 35KFull MSA before JPred filters in FASTA
[TXT]jp_mc_NMUc.full_MSA.fasta.noGaps.html2015-04-17 20:55 30KFull MSA before JPred filters in FASTA
[TXT]jp_mc_NMUc.full_MSA.fasta.withGaps.html2015-04-17 20:55 106KFull MSA before JPred filters in FASTA
[ ]jp_mc_NMUc.hmm2015-04-17 20:55 62KHHMer2 profile of the alignment
[TXT]jp_mc_NMUc.html2015-04-17 20:55 40KHTML prediction and alignment data
[ ]jp_mc_NMUc.input2015-04-17 18:28 335 Raw input data for analysis
[ ]jp_mc_NMUc.jalview2015-04-17 20:55 7.3KJalview annotation file for alignment
[ ]jp_mc_NMUc.jnet2015-04-17 20:55 12KJnet secondary structure output
[TXT]jp_mc_NMUc.profile2015-04-17 20:48 52KPSIBLAST profile from alignment
[ ]jp_mc_NMUc.pssm2015-04-17 20:55 70KPSIBLAST PSSM for Jnet
[TXT]jp_mc_NMUc.results.html2016-02-15 12:17 140KJPred results page
[TXT]jp_mc_NMUc.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_mc_NMUc.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_mc_NMUc.seq2015-04-17 18:28 345 Sequence data file
[TXT]jp_mc_NMUc.simple.html2015-04-17 20:55 2.1KBrief HTML: sequence and prediction only
[TXT]jp_mc_NMUc.svg.html2015-04-17 20:55 131KJalview SVG summary of results
[ ]jp_mc_NMUc.tar.gz2015-04-17 20:55 209KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.