A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 16:25 | 4.7K | JPred server log file |
| README | 2016-02-15 12:17 | 2.1K | Results file descriptions |
| d1n81a_.name | 2015-04-17 16:03 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_VW8ArUW.align | 2015-04-17 16:25 | 814 | PSIBLAST alignment in FASTA format |
| jp_VW8ArUW.als | 2015-04-17 16:25 | 2.7K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_VW8ArUW.blast.gz | 2015-04-17 16:25 | 3.7K | Compressed PSIBLAST output file |
| jp_VW8ArUW.coils.csv | 2015-04-17 16:25 | 1.1K | COILS output in CSV format |
| jp_VW8ArUW.coilseq.lupas_14 | 2015-04-17 16:25 | 7.8K | COILS output, window length 14 |
| jp_VW8ArUW.coilseq.lupas_21 | 2015-04-17 16:25 | 7.8K | COILS output, window length 21 |
| jp_VW8ArUW.coilseq.lupas_28 | 2015-04-17 16:25 | 7.8K | COILS output, window length 28 |
| jp_VW8ArUW.concise | 2015-04-17 16:25 | 9.5K | Prediction: coiled-coil, solvent, alignment |
| jp_VW8ArUW.concise.blc | 2015-04-17 16:25 | 3.6K | BLC format prediction and alignment data |
| jp_VW8ArUW.concise.fasta | 2015-04-17 16:25 | 2.7K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_VW8ArUW.concise.pdf | 2015-04-17 16:25 | 26K | PDF prediction and alignment data |
| jp_VW8ArUW.concise.ps | 2015-04-17 16:25 | 440K | Prediction: coiled-coil, solvent, alignment |
| jp_VW8ArUW.fasta | 2015-04-17 16:23 | 201 | Input query sequence in FASTA format |
| jp_VW8ArUW.full_MSA.fasta | 2015-04-17 16:25 | 2.9K | Full MSA before JPred filters in FASTA |
| jp_VW8ArUW.full_MSA.fasta.noGaps.html | 2015-04-17 16:25 | 4.3K | Full MSA before JPred filters in FASTA |
| jp_VW8ArUW.full_MSA.fasta.withGaps.html | 2015-04-17 16:25 | 5.0K | Full MSA before JPred filters in FASTA |
| jp_VW8ArUW.hmm | 2015-04-17 16:25 | 35K | HHMer2 profile of the alignment |
| jp_VW8ArUW.html | 2015-04-17 16:25 | 22K | HTML prediction and alignment data |
| jp_VW8ArUW.input | 2015-04-17 16:03 | 193 | Raw input data for analysis |
| jp_VW8ArUW.jalview | 2015-04-17 16:25 | 4.6K | Jalview annotation file for alignment |
| jp_VW8ArUW.jnet | 2015-04-17 16:25 | 6.8K | Jnet secondary structure output |
| jp_VW8ArUW.profile | 2015-04-17 16:24 | 30K | PSIBLAST profile from alignment |
| jp_VW8ArUW.pssm | 2015-04-17 16:25 | 40K | PSIBLAST PSSM for Jnet |
| jp_VW8ArUW.results.html | 2016-02-15 12:17 | 84K | JPred results page |
| jp_VW8ArUW.results_jalview.html | 2016-02-24 17:17 | 13K | Jalview results options |
| jp_VW8ArUW.results_jalview_app.html | 2016-02-24 17:17 | 16K | HTML prediction and alignment data |
| jp_VW8ArUW.seq | 2015-04-17 16:03 | 201 | Sequence data file |
| jp_VW8ArUW.simple.html | 2015-04-17 16:25 | 1.5K | Brief HTML: sequence and prediction only |
![[TXT]](jp_VW8ArUW.svg.html) | jp_VW8ArUW.svg.html | 2015-04-17 16:25 | 76K | Jalview SVG summary of results |
| jp_VW8ArUW.tar.gz | 2015-04-17 16:25 | 71K | Archive containing complete results |
