JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:33 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1nvus_.name2015-04-17 16:03 0 Job name flag file
[ ]jp_asrmdvx.align2015-04-17 16:32 261KPSIBLAST alignment in FASTA format
[TXT]jp_asrmdvx.als2015-04-17 16:32 5.0KAlscript command file for PS/PDF output
[ ]jp_asrmdvx.blast.gz2015-04-17 16:29 18MCompressed PSIBLAST output file
[TXT]jp_asrmdvx.coils.csv2015-04-17 16:32 2.8KCOILS output in CSV format
[ ]jp_asrmdvx.coilseq.lupas_142015-04-17 16:32 20KCOILS output, window length 14
[ ]jp_asrmdvx.coilseq.lupas_212015-04-17 16:32 20KCOILS output, window length 21
[ ]jp_asrmdvx.coilseq.lupas_282015-04-17 16:32 20KCOILS output, window length 28
[ ]jp_asrmdvx.concise2015-04-17 16:32 530KPrediction: coiled-coil, solvent, alignment
[ ]jp_asrmdvx.concise.blc2015-04-17 16:32 265KBLC format prediction and alignment data
[ ]jp_asrmdvx.concise.fasta2015-04-17 16:32 266KPrediction: coiled-coil, solvent, alignment
[ ]jp_asrmdvx.concise.pdf2015-04-17 16:32 1.8MPDF prediction and alignment data
[ ]jp_asrmdvx.concise.ps2015-04-17 16:32 33MPrediction: coiled-coil, solvent, alignment
[ ]jp_asrmdvx.fasta2015-04-17 16:23 488 Input query sequence in FASTA format
[ ]jp_asrmdvx.full_MSA.fasta2015-04-17 16:31 36MFull MSA before JPred filters in FASTA
[TXT]jp_asrmdvx.full_MSA.fasta.noGaps.html2015-04-17 16:33 2.5MFull MSA before JPred filters in FASTA
[TXT]jp_asrmdvx.full_MSA.fasta.withGaps.html2015-04-17 16:33 83MFull MSA before JPred filters in FASTA
[ ]jp_asrmdvx.hmm2015-04-17 16:32 88KHHMer2 profile of the alignment
[TXT]jp_asrmdvx.html2015-04-17 16:32 403KHTML prediction and alignment data
[ ]jp_asrmdvx.input2015-04-17 16:03 476 Raw input data for analysis
[ ]jp_asrmdvx.jalview2015-04-17 16:32 10KJalview annotation file for alignment
[ ]jp_asrmdvx.jnet2015-04-17 16:32 17KJnet secondary structure output
[TXT]jp_asrmdvx.profile2015-04-17 16:27 75KPSIBLAST profile from alignment
[ ]jp_asrmdvx.pssm2015-04-17 16:32 101KPSIBLAST PSSM for Jnet
[TXT]jp_asrmdvx.results.html2016-02-15 12:17 195KJPred results page
[TXT]jp_asrmdvx.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_asrmdvx.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_asrmdvx.seq2015-04-17 16:03 488 Sequence data file
[TXT]jp_asrmdvx.simple.html2015-04-17 16:32 2.4KBrief HTML: sequence and prediction only
[TXT]jp_asrmdvx.svg.html2015-04-17 16:33 187KJalview SVG summary of results
[ ]jp_asrmdvx.tar.gz2015-04-17 16:33 27MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.