JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:30 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1o6aa_.name2015-04-17 16:04 0 Job name flag file
[ ]jp_QJPKmDF.align2015-04-17 16:29 81KPSIBLAST alignment in FASTA format
[TXT]jp_QJPKmDF.als2015-04-17 16:29 2.3KAlscript command file for PS/PDF output
[ ]jp_QJPKmDF.blast.gz2015-04-17 16:29 655KCompressed PSIBLAST output file
[TXT]jp_QJPKmDF.coils.csv2015-04-17 16:29 552 COILS output in CSV format
[ ]jp_QJPKmDF.coilseq.lupas_142015-04-17 16:29 3.7KCOILS output, window length 14
[ ]jp_QJPKmDF.coilseq.lupas_212015-04-17 16:29 3.7KCOILS output, window length 21
[ ]jp_QJPKmDF.coilseq.lupas_282015-04-17 16:29 3.7KCOILS output, window length 28
[ ]jp_QJPKmDF.concise2015-04-17 16:29 155KPrediction: coiled-coil, solvent, alignment
[ ]jp_QJPKmDF.concise.blc2015-04-17 16:29 81KBLC format prediction and alignment data
[ ]jp_QJPKmDF.concise.fasta2015-04-17 16:29 82KPrediction: coiled-coil, solvent, alignment
[ ]jp_QJPKmDF.concise.pdf2015-04-17 16:30 537KPDF prediction and alignment data
[ ]jp_QJPKmDF.concise.ps2015-04-17 16:29 9.1MPrediction: coiled-coil, solvent, alignment
[ ]jp_QJPKmDF.fasta2015-04-17 16:26 101 Input query sequence in FASTA format
[ ]jp_QJPKmDF.full_MSA.fasta2015-04-17 16:29 915KFull MSA before JPred filters in FASTA
[TXT]jp_QJPKmDF.full_MSA.fasta.noGaps.html2015-04-17 16:30 785KFull MSA before JPred filters in FASTA
[TXT]jp_QJPKmDF.full_MSA.fasta.withGaps.html2015-04-17 16:30 5.8MFull MSA before JPred filters in FASTA
[ ]jp_QJPKmDF.hmm2015-04-17 16:29 16KHHMer2 profile of the alignment
[TXT]jp_QJPKmDF.html2015-04-17 16:29 237KHTML prediction and alignment data
[ ]jp_QJPKmDF.input2015-04-17 16:04 94 Raw input data for analysis
[ ]jp_QJPKmDF.jalview2015-04-17 16:29 2.6KJalview annotation file for alignment
[ ]jp_QJPKmDF.jnet2015-04-17 16:29 3.3KJnet secondary structure output
[TXT]jp_QJPKmDF.profile2015-04-17 16:28 14KPSIBLAST profile from alignment
[ ]jp_QJPKmDF.pssm2015-04-17 16:29 19KPSIBLAST PSSM for Jnet
[TXT]jp_QJPKmDF.results.html2016-02-15 12:17 46KJPred results page
[TXT]jp_QJPKmDF.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_QJPKmDF.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_QJPKmDF.seq2015-04-17 16:04 101 Sequence data file
[TXT]jp_QJPKmDF.simple.html2015-04-17 16:29 1.2KBrief HTML: sequence and prediction only
[TXT]jp_QJPKmDF.svg.html2015-04-17 16:30 38KJalview SVG summary of results
[ ]jp_QJPKmDF.tar.gz2015-04-17 16:30 1.9MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.