JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:27 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1o75a1.name2015-04-17 18:29 0 Job name flag file
[ ]jp_YytRfIZ.align2015-04-17 20:26 3.7KPSIBLAST alignment in FASTA format
[TXT]jp_YytRfIZ.als2015-04-17 20:26 2.5KAlscript command file for PS/PDF output
[ ]jp_YytRfIZ.blast.gz2015-04-17 20:26 8.8KCompressed PSIBLAST output file
[TXT]jp_YytRfIZ.coils.csv2015-04-17 20:26 786 COILS output in CSV format
[ ]jp_YytRfIZ.coilseq.lupas_142015-04-17 20:26 5.3KCOILS output, window length 14
[ ]jp_YytRfIZ.coilseq.lupas_212015-04-17 20:26 5.3KCOILS output, window length 21
[ ]jp_YytRfIZ.coilseq.lupas_282015-04-17 20:26 5.3KCOILS output, window length 28
[ ]jp_YytRfIZ.concise2015-04-17 20:26 12KPrediction: coiled-coil, solvent, alignment
[ ]jp_YytRfIZ.concise.blc2015-04-17 20:26 5.6KBLC format prediction and alignment data
[ ]jp_YytRfIZ.concise.fasta2015-04-17 20:26 5.0KPrediction: coiled-coil, solvent, alignment
[ ]jp_YytRfIZ.concise.pdf2015-04-17 20:26 31KPDF prediction and alignment data
[ ]jp_YytRfIZ.concise.ps2015-04-17 20:26 617KPrediction: coiled-coil, solvent, alignment
[ ]jp_YytRfIZ.fasta2015-04-17 20:22 140 Input query sequence in FASTA format
[ ]jp_YytRfIZ.full_MSA.fasta2015-04-17 20:26 7.1KFull MSA before JPred filters in FASTA
[TXT]jp_YytRfIZ.full_MSA.fasta.noGaps.html2015-04-17 20:26 9.7KFull MSA before JPred filters in FASTA
[TXT]jp_YytRfIZ.full_MSA.fasta.withGaps.html2015-04-17 20:26 22KFull MSA before JPred filters in FASTA
[ ]jp_YytRfIZ.hmm2015-04-17 20:26 24KHHMer2 profile of the alignment
[TXT]jp_YytRfIZ.html2015-04-17 20:26 20KHTML prediction and alignment data
[ ]jp_YytRfIZ.input2015-04-17 18:29 133 Raw input data for analysis
[ ]jp_YytRfIZ.jalview2015-04-17 20:26 3.3KJalview annotation file for alignment
[ ]jp_YytRfIZ.jnet2015-04-17 20:26 4.7KJnet secondary structure output
[TXT]jp_YytRfIZ.profile2015-04-17 20:25 20KPSIBLAST profile from alignment
[ ]jp_YytRfIZ.pssm2015-04-17 20:26 27KPSIBLAST PSSM for Jnet
[TXT]jp_YytRfIZ.results.html2016-02-15 12:17 60KJPred results page
[TXT]jp_YytRfIZ.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_YytRfIZ.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_YytRfIZ.seq2015-04-17 18:29 140 Sequence data file
[TXT]jp_YytRfIZ.simple.html2015-04-17 20:26 1.3KBrief HTML: sequence and prediction only
[TXT]jp_YytRfIZ.svg.html2015-04-17 20:27 52KJalview SVG summary of results
[ ]jp_YytRfIZ.tar.gz2015-04-17 20:27 79KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.