JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[ ]jp_JgxpmnC.seq2015-04-17 18:29 66 Sequence data file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[ ]jp_JgxpmnC.input2015-04-17 18:29 60 Raw input data for analysis
[ ]jp_JgxpmnC.concise.ps2015-04-17 20:27 143KPrediction: coiled-coil, solvent, alignment
[ ]jp_JgxpmnC.concise.fasta2015-04-17 20:27 1.0KPrediction: coiled-coil, solvent, alignment
[ ]jp_JgxpmnC.concise2015-04-17 20:27 3.1KPrediction: coiled-coil, solvent, alignment
[TXT]jp_JgxpmnC.profile2015-04-17 20:26 8.9KPSIBLAST profile from alignment
[ ]jp_JgxpmnC.align2015-04-17 20:27 416 PSIBLAST alignment in FASTA format
[ ]jp_JgxpmnC.pssm2015-04-17 20:27 11KPSIBLAST PSSM for Jnet
[ ]jp_JgxpmnC.concise.pdf2015-04-17 20:27 10KPDF prediction and alignment data
[TXT]d1oksa_.name2015-04-17 18:29 0 Job name flag file
[ ]jp_JgxpmnC.jnet2015-04-17 20:27 2.0KJnet secondary structure output
[TXT]jp_JgxpmnC.results_jalview.html2016-02-24 17:17 13KJalview results options
[ ]jp_JgxpmnC.jalview2015-04-17 20:27 1.9KJalview annotation file for alignment
[TXT]jp_JgxpmnC.svg.html2015-04-17 20:27 24KJalview SVG summary of results
[TXT]LOG2015-04-17 20:27 4.7KJPred server log file
[TXT]jp_JgxpmnC.results.html2016-02-15 12:17 32KJPred results page
[ ]jp_JgxpmnC.fasta2015-04-17 20:22 66 Input query sequence in FASTA format
[TXT]jp_JgxpmnC.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[TXT]jp_JgxpmnC.html2015-04-17 20:27 8.9KHTML prediction and alignment data
[ ]jp_JgxpmnC.hmm2015-04-17 20:27 9.9KHHMer2 profile of the alignment
[TXT]jp_JgxpmnC.full_MSA.fasta.withGaps.html2015-04-17 20:27 2.8KFull MSA before JPred filters in FASTA
[TXT]jp_JgxpmnC.full_MSA.fasta.noGaps.html2015-04-17 20:27 2.8KFull MSA before JPred filters in FASTA
[ ]jp_JgxpmnC.full_MSA.fasta2015-04-17 20:27 1.0KFull MSA before JPred filters in FASTA
[ ]jp_JgxpmnC.blast.gz2015-04-17 20:27 2.3KCompressed PSIBLAST output file
[ ]jp_JgxpmnC.coilseq.lupas_282015-04-17 20:27 2.2KCOILS output, window length 28
[ ]jp_JgxpmnC.coilseq.lupas_212015-04-17 20:27 2.2KCOILS output, window length 21
[ ]jp_JgxpmnC.coilseq.lupas_142015-04-17 20:27 2.2KCOILS output, window length 14
[TXT]jp_JgxpmnC.coils.csv2015-04-17 20:27 348 COILS output in CSV format
[TXT]jp_JgxpmnC.simple.html2015-04-17 20:27 1.0KBrief HTML: sequence and prediction only
[ ]jp_JgxpmnC.concise.blc2015-04-17 20:27 1.3KBLC format prediction and alignment data
[ ]jp_JgxpmnC.tar.gz2015-04-17 20:27 29KArchive containing complete results
[TXT]jp_JgxpmnC.als2015-04-17 20:27 1.6KAlscript command file for PS/PDF output
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.