JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:30 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1osya_.name2015-04-17 16:05 0 Job name flag file
[ ]jp_W4uUj71.align2015-04-17 16:30 3.7KPSIBLAST alignment in FASTA format
[TXT]jp_W4uUj71.als2015-04-17 16:30 2.1KAlscript command file for PS/PDF output
[ ]jp_W4uUj71.blast.gz2015-04-17 16:30 7.4KCompressed PSIBLAST output file
[TXT]jp_W4uUj71.coils.csv2015-04-17 16:30 714 COILS output in CSV format
[ ]jp_W4uUj71.coilseq.lupas_142015-04-17 16:30 4.8KCOILS output, window length 14
[ ]jp_W4uUj71.coilseq.lupas_212015-04-17 16:30 4.8KCOILS output, window length 21
[ ]jp_W4uUj71.coilseq.lupas_282015-04-17 16:30 4.8KCOILS output, window length 28
[ ]jp_W4uUj71.concise2015-04-17 16:30 12KPrediction: coiled-coil, solvent, alignment
[ ]jp_W4uUj71.concise.blc2015-04-17 16:30 5.4KBLC format prediction and alignment data
[ ]jp_W4uUj71.concise.fasta2015-04-17 16:30 4.9KPrediction: coiled-coil, solvent, alignment
[ ]jp_W4uUj71.concise.pdf2015-04-17 16:30 32KPDF prediction and alignment data
[ ]jp_W4uUj71.concise.ps2015-04-17 16:30 588KPrediction: coiled-coil, solvent, alignment
[ ]jp_W4uUj71.fasta2015-04-17 16:28 128 Input query sequence in FASTA format
[ ]jp_W4uUj71.full_MSA.fasta2015-04-17 16:30 6.2KFull MSA before JPred filters in FASTA
[TXT]jp_W4uUj71.full_MSA.fasta.noGaps.html2015-04-17 16:30 8.3KFull MSA before JPred filters in FASTA
[TXT]jp_W4uUj71.full_MSA.fasta.withGaps.html2015-04-17 16:30 24KFull MSA before JPred filters in FASTA
[ ]jp_W4uUj71.hmm2015-04-17 16:30 21KHHMer2 profile of the alignment
[TXT]jp_W4uUj71.html2015-04-17 16:30 19KHTML prediction and alignment data
[ ]jp_W4uUj71.input2015-04-17 16:05 121 Raw input data for analysis
[ ]jp_W4uUj71.jalview2015-04-17 16:30 3.1KJalview annotation file for alignment
[ ]jp_W4uUj71.jnet2015-04-17 16:30 4.2KJnet secondary structure output
[TXT]jp_W4uUj71.profile2015-04-17 16:29 19KPSIBLAST profile from alignment
[ ]jp_W4uUj71.pssm2015-04-17 16:30 24KPSIBLAST PSSM for Jnet
[TXT]jp_W4uUj71.results.html2016-02-15 12:18 54KJPred results page
[TXT]jp_W4uUj71.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_W4uUj71.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_W4uUj71.seq2015-04-17 16:05 128 Sequence data file
[TXT]jp_W4uUj71.simple.html2015-04-17 16:30 1.3KBrief HTML: sequence and prediction only
[TXT]jp_W4uUj71.svg.html2015-04-17 16:30 46KJalview SVG summary of results
[ ]jp_W4uUj71.tar.gz2015-04-17 16:30 79KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.