JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:52 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1ozna_.name2015-04-17 15:27 0 Job name flag file
[ ]jp_THJam4n.align2015-04-17 16:41 278KPSIBLAST alignment in FASTA format
[TXT]jp_THJam4n.als2015-04-17 16:41 3.8KAlscript command file for PS/PDF output
[ ]jp_THJam4n.blast.gz2015-04-17 16:12 134MCompressed PSIBLAST output file
[TXT]jp_THJam4n.coils.csv2015-04-17 16:41 1.7KCOILS output in CSV format
[ ]jp_THJam4n.coilseq.lupas_142015-04-17 16:41 12KCOILS output, window length 14
[ ]jp_THJam4n.coilseq.lupas_212015-04-17 16:41 12KCOILS output, window length 21
[ ]jp_THJam4n.coilseq.lupas_282015-04-17 16:41 12KCOILS output, window length 28
[ ]jp_THJam4n.concise2015-04-17 16:41 552KPrediction: coiled-coil, solvent, alignment
[ ]jp_THJam4n.concise.blc2015-04-17 16:41 278KBLC format prediction and alignment data
[ ]jp_THJam4n.concise.fasta2015-04-17 16:41 281KPrediction: coiled-coil, solvent, alignment
[ ]jp_THJam4n.concise.pdf2015-04-17 16:42 2.1MPDF prediction and alignment data
[ ]jp_THJam4n.concise.ps2015-04-17 16:41 36MPrediction: coiled-coil, solvent, alignment
[ ]jp_THJam4n.fasta2015-04-17 15:27 300 Input query sequence in FASTA format
[ ]jp_THJam4n.full_MSA.fasta2015-04-17 16:31 484MFull MSA before JPred filters in FASTA
[TXT]jp_THJam4n.full_MSA.fasta.noGaps.html2015-04-17 16:52 18MFull MSA before JPred filters in FASTA
[TXT]jp_THJam4n.full_MSA.fasta.withGaps.html2015-04-17 16:52 788MFull MSA before JPred filters in FASTA
[ ]jp_THJam4n.hmm2015-04-17 16:41 53KHHMer2 profile of the alignment
[TXT]jp_THJam4n.html2015-04-17 16:41 472KHTML prediction and alignment data
[ ]jp_THJam4n.input2015-04-17 15:27 291 Raw input data for analysis
[ ]jp_THJam4n.jalview2015-04-17 16:41 6.3KJalview annotation file for alignment
[ ]jp_THJam4n.jnet2015-04-17 16:41 10KJnet secondary structure output
[TXT]jp_THJam4n.profile2015-04-17 16:05 45KPSIBLAST profile from alignment
[ ]jp_THJam4n.pssm2015-04-17 16:41 61KPSIBLAST PSSM for Jnet
[TXT]jp_THJam4n.results.html2016-02-15 12:18 120KJPred results page
[TXT]jp_THJam4n.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_THJam4n.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_THJam4n.seq2015-04-17 15:27 300 Sequence data file
[TXT]jp_THJam4n.simple.html2015-04-17 16:41 1.8KBrief HTML: sequence and prediction only
[TXT]jp_THJam4n.svg.html2015-04-17 16:52 112KJalview SVG summary of results
[ ]jp_THJam4n.tar.gz2015-04-17 16:53 198MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.