JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:31 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1pp0a_.name2015-04-17 15:27 0 Job name flag file
[ ]jp_mH9uSQX.align2015-04-17 15:30 11KPSIBLAST alignment in FASTA format
[TXT]jp_mH9uSQX.als2015-04-17 15:30 2.8KAlscript command file for PS/PDF output
[ ]jp_mH9uSQX.blast.gz2015-04-17 15:30 29KCompressed PSIBLAST output file
[TXT]jp_mH9uSQX.coils.csv2015-04-17 15:30 1.1KCOILS output in CSV format
[ ]jp_mH9uSQX.coilseq.lupas_142015-04-17 15:30 8.0KCOILS output, window length 14
[ ]jp_mH9uSQX.coilseq.lupas_212015-04-17 15:30 8.0KCOILS output, window length 21
[ ]jp_mH9uSQX.coilseq.lupas_282015-04-17 15:30 8.0KCOILS output, window length 28
[ ]jp_mH9uSQX.concise2015-04-17 15:30 30KPrediction: coiled-coil, solvent, alignment
[ ]jp_mH9uSQX.concise.blc2015-04-17 15:30 14KBLC format prediction and alignment data
[ ]jp_mH9uSQX.concise.fasta2015-04-17 15:30 13KPrediction: coiled-coil, solvent, alignment
[ ]jp_mH9uSQX.concise.pdf2015-04-17 15:30 92KPDF prediction and alignment data
[ ]jp_mH9uSQX.concise.ps2015-04-17 15:30 1.7MPrediction: coiled-coil, solvent, alignment
[ ]jp_mH9uSQX.fasta2015-04-17 15:28 206 Input query sequence in FASTA format
[ ]jp_mH9uSQX.full_MSA.fasta2015-04-17 15:30 29KFull MSA before JPred filters in FASTA
[TXT]jp_mH9uSQX.full_MSA.fasta.noGaps.html2015-04-17 15:30 21KFull MSA before JPred filters in FASTA
[TXT]jp_mH9uSQX.full_MSA.fasta.withGaps.html2015-04-17 15:30 126KFull MSA before JPred filters in FASTA
[ ]jp_mH9uSQX.hmm2015-04-17 15:30 36KHHMer2 profile of the alignment
[TXT]jp_mH9uSQX.html2015-04-17 15:30 41KHTML prediction and alignment data
[ ]jp_mH9uSQX.input2015-04-17 15:27 198 Raw input data for analysis
[ ]jp_mH9uSQX.jalview2015-04-17 15:30 4.7KJalview annotation file for alignment
[ ]jp_mH9uSQX.jnet2015-04-17 15:30 7.0KJnet secondary structure output
[TXT]jp_mH9uSQX.profile2015-04-17 15:30 31KPSIBLAST profile from alignment
[ ]jp_mH9uSQX.pssm2015-04-17 15:30 41KPSIBLAST PSSM for Jnet
[TXT]jp_mH9uSQX.results.html2016-02-15 12:18 85KJPred results page
[TXT]jp_mH9uSQX.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_mH9uSQX.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_mH9uSQX.seq2015-04-17 15:27 206 Sequence data file
[TXT]jp_mH9uSQX.simple.html2015-04-17 15:30 1.5KBrief HTML: sequence and prediction only
[TXT]jp_mH9uSQX.svg.html2015-04-17 15:30 77KJalview SVG summary of results
[ ]jp_mH9uSQX.tar.gz2015-04-17 15:31 205KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.