JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:36 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1pprm1.name2015-04-17 19:08 0 Job name flag file
[ ]jp_RM4QpLq.align2015-04-17 21:36 3.1KPSIBLAST alignment in FASTA format
[TXT]jp_RM4QpLq.als2015-04-17 21:36 2.4KAlscript command file for PS/PDF output
[ ]jp_RM4QpLq.blast.gz2015-04-17 21:36 6.1KCompressed PSIBLAST output file
[TXT]jp_RM4QpLq.coils.csv2015-04-17 21:36 966 COILS output in CSV format
[ ]jp_RM4QpLq.coilseq.lupas_142015-04-17 21:36 6.6KCOILS output, window length 14
[ ]jp_RM4QpLq.coilseq.lupas_212015-04-17 21:36 6.6KCOILS output, window length 21
[ ]jp_RM4QpLq.coilseq.lupas_282015-04-17 21:36 6.6KCOILS output, window length 28
[ ]jp_RM4QpLq.concise2015-04-17 21:36 13KPrediction: coiled-coil, solvent, alignment
[ ]jp_RM4QpLq.concise.blc2015-04-17 21:36 5.4KBLC format prediction and alignment data
[ ]jp_RM4QpLq.concise.fasta2015-04-17 21:36 4.7KPrediction: coiled-coil, solvent, alignment
[ ]jp_RM4QpLq.concise.pdf2015-04-17 21:36 34KPDF prediction and alignment data
[ ]jp_RM4QpLq.concise.ps2015-04-17 21:36 637KPrediction: coiled-coil, solvent, alignment
[ ]jp_RM4QpLq.fasta2015-04-17 21:30 171 Input query sequence in FASTA format
[ ]jp_RM4QpLq.full_MSA.fasta2015-04-17 21:36 7.2KFull MSA before JPred filters in FASTA
[TXT]jp_RM4QpLq.full_MSA.fasta.noGaps.html2015-04-17 21:36 11KFull MSA before JPred filters in FASTA
[TXT]jp_RM4QpLq.full_MSA.fasta.withGaps.html2015-04-17 21:36 19KFull MSA before JPred filters in FASTA
[ ]jp_RM4QpLq.hmm2015-04-17 21:36 29KHHMer2 profile of the alignment
[TXT]jp_RM4QpLq.html2015-04-17 21:36 23KHTML prediction and alignment data
[ ]jp_RM4QpLq.input2015-04-17 19:08 163 Raw input data for analysis
[ ]jp_RM4QpLq.jalview2015-04-17 21:36 4.0KJalview annotation file for alignment
[ ]jp_RM4QpLq.jnet2015-04-17 21:36 5.7KJnet secondary structure output
[TXT]jp_RM4QpLq.profile2015-04-17 21:34 25KPSIBLAST profile from alignment
[ ]jp_RM4QpLq.pssm2015-04-17 21:36 34KPSIBLAST PSSM for Jnet
[TXT]jp_RM4QpLq.results.html2016-02-15 12:18 72KJPred results page
[TXT]jp_RM4QpLq.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_RM4QpLq.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_RM4QpLq.seq2015-04-17 19:08 171 Sequence data file
[TXT]jp_RM4QpLq.simple.html2015-04-17 21:36 1.4KBrief HTML: sequence and prediction only
[TXT]jp_RM4QpLq.svg.html2015-04-17 21:36 64KJalview SVG summary of results
[ ]jp_RM4QpLq.tar.gz2015-04-17 21:36 79KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.