JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:27 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1q2ha_.name2015-04-17 16:42 0 Job name flag file
[ ]jp_BRQbHkn.align2015-04-17 17:27 4.8KPSIBLAST alignment in FASTA format
[TXT]jp_BRQbHkn.als2015-04-17 17:27 1.4KAlscript command file for PS/PDF output
[ ]jp_BRQbHkn.blast.gz2015-04-17 17:27 28KCompressed PSIBLAST output file
[TXT]jp_BRQbHkn.coils.csv2015-04-17 17:27 408 COILS output in CSV format
[ ]jp_BRQbHkn.coilseq.lupas_142015-04-17 17:27 2.6KCOILS output, window length 14
[ ]jp_BRQbHkn.coilseq.lupas_212015-04-17 17:27 2.6KCOILS output, window length 21
[ ]jp_BRQbHkn.coilseq.lupas_282015-04-17 17:27 2.6KCOILS output, window length 28
[ ]jp_BRQbHkn.concise2015-04-17 17:27 12KPrediction: coiled-coil, solvent, alignment
[ ]jp_BRQbHkn.concise.blc2015-04-17 17:27 5.7KBLC format prediction and alignment data
[ ]jp_BRQbHkn.concise.fasta2015-04-17 17:27 5.5KPrediction: coiled-coil, solvent, alignment
[ ]jp_BRQbHkn.concise.pdf2015-04-17 17:27 33KPDF prediction and alignment data
[ ]jp_BRQbHkn.concise.ps2015-04-17 17:27 597KPrediction: coiled-coil, solvent, alignment
[ ]jp_BRQbHkn.fasta2015-04-17 17:25 76 Input query sequence in FASTA format
[ ]jp_BRQbHkn.full_MSA.fasta2015-04-17 17:27 31KFull MSA before JPred filters in FASTA
[TXT]jp_BRQbHkn.full_MSA.fasta.noGaps.html2015-04-17 17:27 53KFull MSA before JPred filters in FASTA
[TXT]jp_BRQbHkn.full_MSA.fasta.withGaps.html2015-04-17 17:27 141KFull MSA before JPred filters in FASTA
[ ]jp_BRQbHkn.hmm2015-04-17 17:27 12KHHMer2 profile of the alignment
[TXT]jp_BRQbHkn.html2015-04-17 17:27 25KHTML prediction and alignment data
[ ]jp_BRQbHkn.input2015-04-17 16:42 70 Raw input data for analysis
[ ]jp_BRQbHkn.jalview2015-04-17 17:27 2.1KJalview annotation file for alignment
[ ]jp_BRQbHkn.jnet2015-04-17 17:27 2.4KJnet secondary structure output
[TXT]jp_BRQbHkn.profile2015-04-17 17:26 10KPSIBLAST profile from alignment
[ ]jp_BRQbHkn.pssm2015-04-17 17:27 14KPSIBLAST PSSM for Jnet
[TXT]jp_BRQbHkn.results.html2016-02-15 12:18 34KJPred results page
[TXT]jp_BRQbHkn.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_BRQbHkn.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_BRQbHkn.seq2015-04-17 16:42 76 Sequence data file
[TXT]jp_BRQbHkn.simple.html2015-04-17 17:27 1.0KBrief HTML: sequence and prediction only
[TXT]jp_BRQbHkn.svg.html2015-04-17 17:27 26KJalview SVG summary of results
[ ]jp_BRQbHkn.tar.gz2015-04-17 17:27 108KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.