JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:30 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1q5ya_.name2015-04-17 16:42 0 Job name flag file
[ ]jp_cTfe4XP.align2015-04-17 17:29 45KPSIBLAST alignment in FASTA format
[TXT]jp_cTfe4XP.als2015-04-17 17:29 2.1KAlscript command file for PS/PDF output
[ ]jp_cTfe4XP.blast.gz2015-04-17 17:29 127KCompressed PSIBLAST output file
[TXT]jp_cTfe4XP.coils.csv2015-04-17 17:29 534 COILS output in CSV format
[ ]jp_cTfe4XP.coilseq.lupas_142015-04-17 17:29 3.5KCOILS output, window length 14
[ ]jp_cTfe4XP.coilseq.lupas_212015-04-17 17:29 3.5KCOILS output, window length 21
[ ]jp_cTfe4XP.coilseq.lupas_282015-04-17 17:29 3.5KCOILS output, window length 28
[ ]jp_cTfe4XP.concise2015-04-17 17:29 88KPrediction: coiled-coil, solvent, alignment
[ ]jp_cTfe4XP.concise.blc2015-04-17 17:29 45KBLC format prediction and alignment data
[ ]jp_cTfe4XP.concise.fasta2015-04-17 17:29 46KPrediction: coiled-coil, solvent, alignment
[ ]jp_cTfe4XP.concise.pdf2015-04-17 17:29 313KPDF prediction and alignment data
[ ]jp_cTfe4XP.concise.ps2015-04-17 17:29 5.2MPrediction: coiled-coil, solvent, alignment
[ ]jp_cTfe4XP.fasta2015-04-17 17:26 98 Input query sequence in FASTA format
[ ]jp_cTfe4XP.full_MSA.fasta2015-04-17 17:29 108KFull MSA before JPred filters in FASTA
[TXT]jp_cTfe4XP.full_MSA.fasta.noGaps.html2015-04-17 17:29 153KFull MSA before JPred filters in FASTA
[TXT]jp_cTfe4XP.full_MSA.fasta.withGaps.html2015-04-17 17:29 433KFull MSA before JPred filters in FASTA
[ ]jp_cTfe4XP.hmm2015-04-17 17:29 16KHHMer2 profile of the alignment
[TXT]jp_cTfe4XP.html2015-04-17 17:29 141KHTML prediction and alignment data
[ ]jp_cTfe4XP.input2015-04-17 16:42 91 Raw input data for analysis
[ ]jp_cTfe4XP.jalview2015-04-17 17:29 2.5KJalview annotation file for alignment
[ ]jp_cTfe4XP.jnet2015-04-17 17:29 3.1KJnet secondary structure output
[TXT]jp_cTfe4XP.profile2015-04-17 17:29 14KPSIBLAST profile from alignment
[ ]jp_cTfe4XP.pssm2015-04-17 17:29 18KPSIBLAST PSSM for Jnet
[TXT]jp_cTfe4XP.results.html2016-02-15 12:18 44KJPred results page
[TXT]jp_cTfe4XP.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_cTfe4XP.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_cTfe4XP.seq2015-04-17 16:42 98 Sequence data file
[TXT]jp_cTfe4XP.simple.html2015-04-17 17:29 1.2KBrief HTML: sequence and prediction only
[TXT]jp_cTfe4XP.svg.html2015-04-17 17:30 36KJalview SVG summary of results
[ ]jp_cTfe4XP.tar.gz2015-04-17 17:30 612KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.