JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:01 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1q74a_.name2015-04-17 16:06 0 Job name flag file
[ ]jp_p26uiyC.align2015-04-17 16:59 277KPSIBLAST alignment in FASTA format
[TXT]jp_p26uiyC.als2015-04-17 16:59 3.4KAlscript command file for PS/PDF output
[ ]jp_p26uiyC.blast.gz2015-04-17 16:57 7.7MCompressed PSIBLAST output file
[TXT]jp_p26uiyC.coils.csv2015-04-17 16:59 1.7KCOILS output in CSV format
[ ]jp_p26uiyC.coilseq.lupas_142015-04-17 16:59 12KCOILS output, window length 14
[ ]jp_p26uiyC.coilseq.lupas_212015-04-17 16:59 12KCOILS output, window length 21
[ ]jp_p26uiyC.coilseq.lupas_282015-04-17 16:59 12KCOILS output, window length 28
[ ]jp_p26uiyC.concise2015-04-17 16:59 550KPrediction: coiled-coil, solvent, alignment
[ ]jp_p26uiyC.concise.blc2015-04-17 16:59 278KBLC format prediction and alignment data
[ ]jp_p26uiyC.concise.fasta2015-04-17 16:59 280KPrediction: coiled-coil, solvent, alignment
[ ]jp_p26uiyC.concise.pdf2015-04-17 17:00 1.8MPDF prediction and alignment data
[ ]jp_p26uiyC.concise.ps2015-04-17 16:59 33MPrediction: coiled-coil, solvent, alignment
[ ]jp_p26uiyC.fasta2015-04-17 16:29 303 Input query sequence in FASTA format
[ ]jp_p26uiyC.full_MSA.fasta2015-04-17 16:58 19MFull MSA before JPred filters in FASTA
[TXT]jp_p26uiyC.full_MSA.fasta.noGaps.html2015-04-17 17:01 2.0MFull MSA before JPred filters in FASTA
[TXT]jp_p26uiyC.full_MSA.fasta.withGaps.html2015-04-17 17:01 49MFull MSA before JPred filters in FASTA
[ ]jp_p26uiyC.hmm2015-04-17 16:59 54KHHMer2 profile of the alignment
[TXT]jp_p26uiyC.html2015-04-17 16:59 477KHTML prediction and alignment data
[ ]jp_p26uiyC.input2015-04-17 16:06 294 Raw input data for analysis
[ ]jp_p26uiyC.jalview2015-04-17 16:59 6.5KJalview annotation file for alignment
[ ]jp_p26uiyC.jnet2015-04-17 16:59 10KJnet secondary structure output
[TXT]jp_p26uiyC.profile2015-04-17 16:48 46KPSIBLAST profile from alignment
[ ]jp_p26uiyC.pssm2015-04-17 16:59 62KPSIBLAST PSSM for Jnet
[TXT]jp_p26uiyC.results.html2016-02-15 12:18 120KJPred results page
[TXT]jp_p26uiyC.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_p26uiyC.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_p26uiyC.seq2015-04-17 16:06 303 Sequence data file
[TXT]jp_p26uiyC.simple.html2015-04-17 16:59 1.8KBrief HTML: sequence and prediction only
[TXT]jp_p26uiyC.svg.html2015-04-17 17:01 112KJalview SVG summary of results
[ ]jp_p26uiyC.tar.gz2015-04-17 17:01 15MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.