JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:04 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1qwga_.name2015-04-17 19:09 0 Job name flag file
[ ]jp_h96wz2T.align2015-04-17 22:04 80KPSIBLAST alignment in FASTA format
[TXT]jp_h96wz2T.als2015-04-17 22:04 3.7KAlscript command file for PS/PDF output
[ ]jp_h96wz2T.blast.gz2015-04-17 22:04 323KCompressed PSIBLAST output file
[TXT]jp_h96wz2T.coils.csv2015-04-17 22:04 1.5KCOILS output in CSV format
[ ]jp_h96wz2T.coilseq.lupas_142015-04-17 22:04 11KCOILS output, window length 14
[ ]jp_h96wz2T.coilseq.lupas_212015-04-17 22:04 11KCOILS output, window length 21
[ ]jp_h96wz2T.coilseq.lupas_282015-04-17 22:04 11KCOILS output, window length 28
[ ]jp_h96wz2T.concise2015-04-17 22:04 165KPrediction: coiled-coil, solvent, alignment
[ ]jp_h96wz2T.concise.blc2015-04-17 22:04 82KBLC format prediction and alignment data
[ ]jp_h96wz2T.concise.fasta2015-04-17 22:04 82KPrediction: coiled-coil, solvent, alignment
[ ]jp_h96wz2T.concise.pdf2015-04-17 22:04 563KPDF prediction and alignment data
[ ]jp_h96wz2T.concise.ps2015-04-17 22:04 10MPrediction: coiled-coil, solvent, alignment
[ ]jp_h96wz2T.fasta2015-04-17 21:32 267 Input query sequence in FASTA format
[ ]jp_h96wz2T.full_MSA.fasta2015-04-17 22:04 470KFull MSA before JPred filters in FASTA
[TXT]jp_h96wz2T.full_MSA.fasta.noGaps.html2015-04-17 22:04 192KFull MSA before JPred filters in FASTA
[TXT]jp_h96wz2T.full_MSA.fasta.withGaps.html2015-04-17 22:04 1.8MFull MSA before JPred filters in FASTA
[ ]jp_h96wz2T.hmm2015-04-17 22:04 47KHHMer2 profile of the alignment
[TXT]jp_h96wz2T.html2015-04-17 22:04 161KHTML prediction and alignment data
[ ]jp_h96wz2T.input2015-04-17 19:09 258 Raw input data for analysis
[ ]jp_h96wz2T.jalview2015-04-17 22:04 5.8KJalview annotation file for alignment
[ ]jp_h96wz2T.jnet2015-04-17 22:04 9.2KJnet secondary structure output
[TXT]jp_h96wz2T.profile2015-04-17 21:54 40KPSIBLAST profile from alignment
[ ]jp_h96wz2T.pssm2015-04-17 22:04 54KPSIBLAST PSSM for Jnet
[TXT]jp_h96wz2T.results.html2016-02-15 12:18 110KJPred results page
[TXT]jp_h96wz2T.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_h96wz2T.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_h96wz2T.seq2015-04-17 19:09 267 Sequence data file
[TXT]jp_h96wz2T.simple.html2015-04-17 22:04 1.8KBrief HTML: sequence and prediction only
[TXT]jp_h96wz2T.svg.html2015-04-17 22:04 102KJalview SVG summary of results
[ ]jp_h96wz2T.tar.gz2015-04-17 22:04 1.2MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.