JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:32 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1r0va1.name2015-04-17 17:55 0 Job name flag file
[ ]jp_k3yERMB.align2015-04-17 19:32 13KPSIBLAST alignment in FASTA format
[TXT]jp_k3yERMB.als2015-04-17 19:32 2.1KAlscript command file for PS/PDF output
[ ]jp_k3yERMB.blast.gz2015-04-17 19:32 33KCompressed PSIBLAST output file
[TXT]jp_k3yERMB.coils.csv2015-04-17 19:32 498 COILS output in CSV format
[ ]jp_k3yERMB.coilseq.lupas_142015-04-17 19:32 3.3KCOILS output, window length 14
[ ]jp_k3yERMB.coilseq.lupas_212015-04-17 19:32 3.3KCOILS output, window length 21
[ ]jp_k3yERMB.coilseq.lupas_282015-04-17 19:32 3.3KCOILS output, window length 28
[ ]jp_k3yERMB.concise2015-04-17 19:32 29KPrediction: coiled-coil, solvent, alignment
[ ]jp_k3yERMB.concise.blc2015-04-17 19:32 14KBLC format prediction and alignment data
[ ]jp_k3yERMB.concise.fasta2015-04-17 19:32 14KPrediction: coiled-coil, solvent, alignment
[ ]jp_k3yERMB.concise.pdf2015-04-17 19:32 89KPDF prediction and alignment data
[ ]jp_k3yERMB.concise.ps2015-04-17 19:32 1.6MPrediction: coiled-coil, solvent, alignment
[ ]jp_k3yERMB.fasta2015-04-17 19:28 92 Input query sequence in FASTA format
[ ]jp_k3yERMB.full_MSA.fasta2015-04-17 19:32 101KFull MSA before JPred filters in FASTA
[TXT]jp_k3yERMB.full_MSA.fasta.noGaps.html2015-04-17 19:32 43KFull MSA before JPred filters in FASTA
[TXT]jp_k3yERMB.full_MSA.fasta.withGaps.html2015-04-17 19:32 322KFull MSA before JPred filters in FASTA
[ ]jp_k3yERMB.hmm2015-04-17 19:32 15KHHMer2 profile of the alignment
[TXT]jp_k3yERMB.html2015-04-17 19:32 50KHTML prediction and alignment data
[ ]jp_k3yERMB.input2015-04-17 17:55 85 Raw input data for analysis
[ ]jp_k3yERMB.jalview2015-04-17 19:32 2.4KJalview annotation file for alignment
[ ]jp_k3yERMB.jnet2015-04-17 19:32 2.9KJnet secondary structure output
[TXT]jp_k3yERMB.profile2015-04-17 19:31 13KPSIBLAST profile from alignment
[ ]jp_k3yERMB.pssm2015-04-17 19:32 17KPSIBLAST PSSM for Jnet
[TXT]jp_k3yERMB.results.html2016-02-15 12:18 41KJPred results page
[TXT]jp_k3yERMB.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_k3yERMB.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_k3yERMB.seq2015-04-17 17:55 92 Sequence data file
[TXT]jp_k3yERMB.simple.html2015-04-17 19:32 1.2KBrief HTML: sequence and prediction only
[TXT]jp_k3yERMB.svg.html2015-04-17 19:32 33KJalview SVG summary of results
[ ]jp_k3yERMB.tar.gz2015-04-17 19:32 202KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.