A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:15 | 4.7K | JPred server log file |
| README | 2016-02-15 12:18 | 2.1K | Results file descriptions |
| d1r7la_.name | 2015-04-17 17:55 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_8C4GvTi.align | 2015-04-17 20:15 | 6.3K | PSIBLAST alignment in FASTA format |
| jp_8C4GvTi.als | 2015-04-17 20:15 | 2.1K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_8C4GvTi.blast.gz | 2015-04-17 20:15 | 15K | Compressed PSIBLAST output file |
| jp_8C4GvTi.coils.csv | 2015-04-17 20:15 | 648 | COILS output in CSV format |
| jp_8C4GvTi.coilseq.lupas_14 | 2015-04-17 20:15 | 4.3K | COILS output, window length 14 |
| jp_8C4GvTi.coilseq.lupas_21 | 2015-04-17 20:15 | 4.3K | COILS output, window length 21 |
| jp_8C4GvTi.coilseq.lupas_28 | 2015-04-17 20:15 | 4.3K | COILS output, window length 28 |
| jp_8C4GvTi.concise | 2015-04-17 20:15 | 16K | Prediction: coiled-coil, solvent, alignment |
| jp_8C4GvTi.concise.blc | 2015-04-17 20:15 | 7.8K | BLC format prediction and alignment data |
| jp_8C4GvTi.concise.fasta | 2015-04-17 20:15 | 7.4K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_8C4GvTi.concise.pdf | 2015-04-17 20:15 | 51K | PDF prediction and alignment data |
| jp_8C4GvTi.concise.ps | 2015-04-17 20:15 | 885K | Prediction: coiled-coil, solvent, alignment |
| jp_8C4GvTi.fasta | 2015-04-17 19:28 | 117 | Input query sequence in FASTA format |
| jp_8C4GvTi.full_MSA.fasta | 2015-04-17 20:15 | 31K | Full MSA before JPred filters in FASTA |
| jp_8C4GvTi.full_MSA.fasta.noGaps.html | 2015-04-17 20:15 | 12K | Full MSA before JPred filters in FASTA |
| jp_8C4GvTi.full_MSA.fasta.withGaps.html | 2015-04-17 20:15 | 107K | Full MSA before JPred filters in FASTA |
| jp_8C4GvTi.hmm | 2015-04-17 20:15 | 19K | HHMer2 profile of the alignment |
| jp_8C4GvTi.html | 2015-04-17 20:15 | 26K | HTML prediction and alignment data |
| jp_8C4GvTi.input | 2015-04-17 17:55 | 110 | Raw input data for analysis |
| jp_8C4GvTi.jalview | 2015-04-17 20:15 | 2.9K | Jalview annotation file for alignment |
| jp_8C4GvTi.jnet | 2015-04-17 20:15 | 3.8K | Jnet secondary structure output |
| jp_8C4GvTi.profile | 2015-04-17 20:12 | 17K | PSIBLAST profile from alignment |
| jp_8C4GvTi.pssm | 2015-04-17 20:15 | 22K | PSIBLAST PSSM for Jnet |
| jp_8C4GvTi.results.html | 2016-02-15 12:18 | 51K | JPred results page |
| jp_8C4GvTi.results_jalview.html | 2016-02-24 17:17 | 13K | Jalview results options |
| jp_8C4GvTi.results_jalview_app.html | 2016-02-24 17:17 | 16K | HTML prediction and alignment data |
| jp_8C4GvTi.seq | 2015-04-17 17:55 | 117 | Sequence data file |
| jp_8C4GvTi.simple.html | 2015-04-17 20:15 | 1.2K | Brief HTML: sequence and prediction only |
![[TXT]](jp_8C4GvTi.svg.html) | jp_8C4GvTi.svg.html | 2015-04-17 20:15 | 43K | Jalview SVG summary of results |
| jp_8C4GvTi.tar.gz | 2015-04-17 20:15 | 122K | Archive containing complete results |
