JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:36 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1rcqa2.name2015-04-17 17:19 0 Job name flag file
[ ]jp_YqFXLZp.align2015-04-17 18:35 242KPSIBLAST alignment in FASTA format
[TXT]jp_YqFXLZp.als2015-04-17 18:35 3.8KAlscript command file for PS/PDF output
[ ]jp_YqFXLZp.blast.gz2015-04-17 18:34 6.0MCompressed PSIBLAST output file
[TXT]jp_YqFXLZp.coils.csv2015-04-17 18:35 1.4KCOILS output in CSV format
[ ]jp_YqFXLZp.coilseq.lupas_142015-04-17 18:35 9.5KCOILS output, window length 14
[ ]jp_YqFXLZp.coilseq.lupas_212015-04-17 18:35 9.5KCOILS output, window length 21
[ ]jp_YqFXLZp.coilseq.lupas_282015-04-17 18:35 9.5KCOILS output, window length 28
[ ]jp_YqFXLZp.concise2015-04-17 18:35 477KPrediction: coiled-coil, solvent, alignment
[ ]jp_YqFXLZp.concise.blc2015-04-17 18:35 242KBLC format prediction and alignment data
[ ]jp_YqFXLZp.concise.fasta2015-04-17 18:35 245KPrediction: coiled-coil, solvent, alignment
[ ]jp_YqFXLZp.concise.pdf2015-04-17 18:35 1.8MPDF prediction and alignment data
[ ]jp_YqFXLZp.concise.ps2015-04-17 18:35 31MPrediction: coiled-coil, solvent, alignment
[ ]jp_YqFXLZp.fasta2015-04-17 18:26 242 Input query sequence in FASTA format
[ ]jp_YqFXLZp.full_MSA.fasta2015-04-17 18:34 9.5MFull MSA before JPred filters in FASTA
[TXT]jp_YqFXLZp.full_MSA.fasta.noGaps.html2015-04-17 18:36 1.6MFull MSA before JPred filters in FASTA
[TXT]jp_YqFXLZp.full_MSA.fasta.withGaps.html2015-04-17 18:36 32MFull MSA before JPred filters in FASTA
[ ]jp_YqFXLZp.hmm2015-04-17 18:35 42KHHMer2 profile of the alignment
[TXT]jp_YqFXLZp.html2015-04-17 18:35 456KHTML prediction and alignment data
[ ]jp_YqFXLZp.input2015-04-17 17:19 233 Raw input data for analysis
[ ]jp_YqFXLZp.jalview2015-04-17 18:35 5.4KJalview annotation file for alignment
[ ]jp_YqFXLZp.jnet2015-04-17 18:35 8.3KJnet secondary structure output
[TXT]jp_YqFXLZp.profile2015-04-17 18:32 36KPSIBLAST profile from alignment
[ ]jp_YqFXLZp.pssm2015-04-17 18:35 49KPSIBLAST PSSM for Jnet
[TXT]jp_YqFXLZp.results.html2016-02-15 12:18 101KJPred results page
[TXT]jp_YqFXLZp.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_YqFXLZp.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_YqFXLZp.seq2015-04-17 17:19 242 Sequence data file
[TXT]jp_YqFXLZp.simple.html2015-04-17 18:35 1.8KBrief HTML: sequence and prediction only
[TXT]jp_YqFXLZp.svg.html2015-04-17 18:36 93KJalview SVG summary of results
[ ]jp_YqFXLZp.tar.gz2015-04-17 18:36 12MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.