JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:30 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1rk8c_.name2015-04-17 16:42 0 Job name flag file
[ ]jp_4NpxoCG.align2015-04-17 17:30 3.4KPSIBLAST alignment in FASTA format
[TXT]jp_4NpxoCG.als2015-04-17 17:30 1.4KAlscript command file for PS/PDF output
[ ]jp_4NpxoCG.blast.gz2015-04-17 17:30 12KCompressed PSIBLAST output file
[TXT]jp_4NpxoCG.coils.csv2015-04-17 17:30 228 COILS output in CSV format
[ ]jp_4NpxoCG.coilseq.lupas_142015-04-17 17:30 1.4KCOILS output, window length 14
[ ]jp_4NpxoCG.coilseq.lupas_212015-04-17 17:30 1.4KCOILS output, window length 21
[ ]jp_4NpxoCG.coilseq.lupas_282015-04-17 17:30 1.4KCOILS output, window length 28
[ ]jp_4NpxoCG.concise2015-04-17 17:30 7.6KPrediction: coiled-coil, solvent, alignment
[ ]jp_4NpxoCG.concise.blc2015-04-17 17:30 3.9KBLC format prediction and alignment data
[ ]jp_4NpxoCG.concise.fasta2015-04-17 17:30 3.8KPrediction: coiled-coil, solvent, alignment
[ ]jp_4NpxoCG.concise.pdf2015-04-17 17:30 19KPDF prediction and alignment data
[ ]jp_4NpxoCG.concise.ps2015-04-17 17:30 343KPrediction: coiled-coil, solvent, alignment
[ ]jp_4NpxoCG.fasta2015-04-17 17:26 46 Input query sequence in FASTA format
[ ]jp_4NpxoCG.full_MSA.fasta2015-04-17 17:30 15KFull MSA before JPred filters in FASTA
[TXT]jp_4NpxoCG.full_MSA.fasta.noGaps.html2015-04-17 17:30 35KFull MSA before JPred filters in FASTA
[TXT]jp_4NpxoCG.full_MSA.fasta.withGaps.html2015-04-17 17:30 70KFull MSA before JPred filters in FASTA
[ ]jp_4NpxoCG.hmm2015-04-17 17:30 6.2KHHMer2 profile of the alignment
[TXT]jp_4NpxoCG.html2015-04-17 17:30 20KHTML prediction and alignment data
[ ]jp_4NpxoCG.input2015-04-17 16:42 40 Raw input data for analysis
[ ]jp_4NpxoCG.jalview2015-04-17 17:30 1.4KJalview annotation file for alignment
[ ]jp_4NpxoCG.jnet2015-04-17 17:30 1.3KJnet secondary structure output
[TXT]jp_4NpxoCG.profile2015-04-17 17:29 5.7KPSIBLAST profile from alignment
[ ]jp_4NpxoCG.pssm2015-04-17 17:30 7.1KPSIBLAST PSSM for Jnet
[TXT]jp_4NpxoCG.results.html2016-02-15 12:18 24KJPred results page
[TXT]jp_4NpxoCG.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_4NpxoCG.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_4NpxoCG.seq2015-04-17 16:42 46 Sequence data file
[TXT]jp_4NpxoCG.simple.html2015-04-17 17:30 1.0KBrief HTML: sequence and prediction only
[TXT]jp_4NpxoCG.svg.html2015-04-17 17:30 16KJalview SVG summary of results
[ ]jp_4NpxoCG.tar.gz2015-04-17 17:30 59KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.