JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]d1ro2a_.name2015-04-17 16:28 0 Job name flag file
[ ]jp_yycvKgZ.input2015-04-17 16:28 217 Raw input data for analysis
[ ]jp_yycvKgZ.fasta2015-04-17 17:02 225 Input query sequence in FASTA format
[ ]jp_yycvKgZ.seq2015-04-17 16:28 225 Sequence data file
[TXT]jp_yycvKgZ.coils.csv2015-04-17 17:07 1.3KCOILS output in CSV format
[TXT]jp_yycvKgZ.simple.html2015-04-17 17:07 1.6KBrief HTML: sequence and prediction only
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]jp_yycvKgZ.als2015-04-17 17:07 3.5KAlscript command file for PS/PDF output
[TXT]LOG2015-04-17 17:08 4.7KJPred server log file
[ ]jp_yycvKgZ.jalview2015-04-17 17:07 5.0KJalview annotation file for alignment
[ ]jp_yycvKgZ.jnet2015-04-17 17:07 7.7KJnet secondary structure output
[ ]jp_yycvKgZ.coilseq.lupas_142015-04-17 17:07 8.8KCOILS output, window length 14
[ ]jp_yycvKgZ.coilseq.lupas_212015-04-17 17:07 8.8KCOILS output, window length 21
[ ]jp_yycvKgZ.coilseq.lupas_282015-04-17 17:07 8.8KCOILS output, window length 28
[TXT]jp_yycvKgZ.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_yycvKgZ.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[TXT]jp_yycvKgZ.profile2015-04-17 17:05 34KPSIBLAST profile from alignment
[ ]jp_yycvKgZ.hmm2015-04-17 17:07 39KHHMer2 profile of the alignment
[ ]jp_yycvKgZ.pssm2015-04-17 17:07 45KPSIBLAST PSSM for Jnet
[TXT]jp_yycvKgZ.svg.html2015-04-17 17:08 85KJalview SVG summary of results
[TXT]jp_yycvKgZ.results.html2016-02-15 12:18 93KJPred results page
[ ]jp_yycvKgZ.align2015-04-17 17:07 224KPSIBLAST alignment in FASTA format
[ ]jp_yycvKgZ.concise.blc2015-04-17 17:07 224KBLC format prediction and alignment data
[ ]jp_yycvKgZ.concise.fasta2015-04-17 17:07 226KPrediction: coiled-coil, solvent, alignment
[TXT]jp_yycvKgZ.full_MSA.fasta.noGaps.html2015-04-17 17:08 395KFull MSA before JPred filters in FASTA
[TXT]jp_yycvKgZ.html2015-04-17 17:07 431KHTML prediction and alignment data
[ ]jp_yycvKgZ.concise2015-04-17 17:07 442KPrediction: coiled-coil, solvent, alignment
[ ]jp_yycvKgZ.blast.gz2015-04-17 17:07 929KCompressed PSIBLAST output file
[ ]jp_yycvKgZ.concise.pdf2015-04-17 17:08 1.4MPDF prediction and alignment data
[ ]jp_yycvKgZ.full_MSA.fasta2015-04-17 17:07 2.9MFull MSA before JPred filters in FASTA
[ ]jp_yycvKgZ.tar.gz2015-04-17 17:08 3.3MArchive containing complete results
[TXT]jp_yycvKgZ.full_MSA.fasta.withGaps.html2015-04-17 17:08 8.1MFull MSA before JPred filters in FASTA
[ ]jp_yycvKgZ.concise.ps2015-04-17 17:07 26MPrediction: coiled-coil, solvent, alignment
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.