JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:20 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1s98a_.name2015-04-17 18:31 0 Job name flag file
[ ]jp_dFK6uQK.align2015-04-17 21:19 89KPSIBLAST alignment in FASTA format
[TXT]jp_dFK6uQK.als2015-04-17 21:19 2.3KAlscript command file for PS/PDF output
[ ]jp_dFK6uQK.blast.gz2015-04-17 21:18 2.6MCompressed PSIBLAST output file
[TXT]jp_dFK6uQK.coils.csv2015-04-17 21:19 612 COILS output in CSV format
[ ]jp_dFK6uQK.coilseq.lupas_142015-04-17 21:19 4.1KCOILS output, window length 14
[ ]jp_dFK6uQK.coilseq.lupas_212015-04-17 21:19 4.1KCOILS output, window length 21
[ ]jp_dFK6uQK.coilseq.lupas_282015-04-17 21:19 4.1KCOILS output, window length 28
[ ]jp_dFK6uQK.concise2015-04-17 21:19 173KPrediction: coiled-coil, solvent, alignment
[ ]jp_dFK6uQK.concise.blc2015-04-17 21:19 89KBLC format prediction and alignment data
[ ]jp_dFK6uQK.concise.fasta2015-04-17 21:19 90KPrediction: coiled-coil, solvent, alignment
[ ]jp_dFK6uQK.concise.pdf2015-04-17 21:20 572KPDF prediction and alignment data
[ ]jp_dFK6uQK.concise.ps2015-04-17 21:19 10MPrediction: coiled-coil, solvent, alignment
[ ]jp_dFK6uQK.fasta2015-04-17 20:25 111 Input query sequence in FASTA format
[ ]jp_dFK6uQK.full_MSA.fasta2015-04-17 21:19 5.3MFull MSA before JPred filters in FASTA
[TXT]jp_dFK6uQK.full_MSA.fasta.noGaps.html2015-04-17 21:20 1.0MFull MSA before JPred filters in FASTA
[TXT]jp_dFK6uQK.full_MSA.fasta.withGaps.html2015-04-17 21:20 15MFull MSA before JPred filters in FASTA
[ ]jp_dFK6uQK.hmm2015-04-17 21:19 18KHHMer2 profile of the alignment
[TXT]jp_dFK6uQK.html2015-04-17 21:19 249KHTML prediction and alignment data
[ ]jp_dFK6uQK.input2015-04-17 18:31 104 Raw input data for analysis
[ ]jp_dFK6uQK.jalview2015-04-17 21:19 2.8KJalview annotation file for alignment
[ ]jp_dFK6uQK.jnet2015-04-17 21:19 3.6KJnet secondary structure output
[TXT]jp_dFK6uQK.profile2015-04-17 21:01 16KPSIBLAST profile from alignment
[ ]jp_dFK6uQK.pssm2015-04-17 21:19 21KPSIBLAST PSSM for Jnet
[TXT]jp_dFK6uQK.results.html2016-02-15 12:18 49KJPred results page
[TXT]jp_dFK6uQK.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_dFK6uQK.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_dFK6uQK.seq2015-04-17 18:31 111 Sequence data file
[TXT]jp_dFK6uQK.simple.html2015-04-17 21:19 1.2KBrief HTML: sequence and prediction only
[TXT]jp_dFK6uQK.svg.html2015-04-17 21:20 41KJalview SVG summary of results
[ ]jp_dFK6uQK.tar.gz2015-04-17 21:20 4.7MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.