JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:30 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1seda_.name2015-04-17 16:43 0 Job name flag file
[ ]jp_e48tIqG.align2015-04-17 17:30 6.0KPSIBLAST alignment in FASTA format
[TXT]jp_e48tIqG.als2015-04-17 17:30 2.1KAlscript command file for PS/PDF output
[ ]jp_e48tIqG.blast.gz2015-04-17 17:30 8.3KCompressed PSIBLAST output file
[TXT]jp_e48tIqG.coils.csv2015-04-17 17:30 702 COILS output in CSV format
[ ]jp_e48tIqG.coilseq.lupas_142015-04-17 17:30 4.7KCOILS output, window length 14
[ ]jp_e48tIqG.coilseq.lupas_212015-04-17 17:30 4.7KCOILS output, window length 21
[ ]jp_e48tIqG.coilseq.lupas_282015-04-17 17:30 4.7KCOILS output, window length 28
[ ]jp_e48tIqG.concise2015-04-17 17:30 16KPrediction: coiled-coil, solvent, alignment
[ ]jp_e48tIqG.concise.blc2015-04-17 17:30 7.7KBLC format prediction and alignment data
[ ]jp_e48tIqG.concise.fasta2015-04-17 17:30 7.3KPrediction: coiled-coil, solvent, alignment
[ ]jp_e48tIqG.concise.pdf2015-04-17 17:30 53KPDF prediction and alignment data
[ ]jp_e48tIqG.concise.ps2015-04-17 17:30 910KPrediction: coiled-coil, solvent, alignment
[ ]jp_e48tIqG.fasta2015-04-17 17:28 126 Input query sequence in FASTA format
[ ]jp_e48tIqG.full_MSA.fasta2015-04-17 17:30 7.6KFull MSA before JPred filters in FASTA
[TXT]jp_e48tIqG.full_MSA.fasta.noGaps.html2015-04-17 17:30 14KFull MSA before JPred filters in FASTA
[TXT]jp_e48tIqG.full_MSA.fasta.withGaps.html2015-04-17 17:30 14KFull MSA before JPred filters in FASTA
[ ]jp_e48tIqG.hmm2015-04-17 17:30 21KHHMer2 profile of the alignment
[TXT]jp_e48tIqG.html2015-04-17 17:30 28KHTML prediction and alignment data
[ ]jp_e48tIqG.input2015-04-17 16:43 119 Raw input data for analysis
[ ]jp_e48tIqG.jalview2015-04-17 17:30 3.1KJalview annotation file for alignment
[ ]jp_e48tIqG.jnet2015-04-17 17:30 4.2KJnet secondary structure output
[TXT]jp_e48tIqG.profile2015-04-17 17:29 18KPSIBLAST profile from alignment
[ ]jp_e48tIqG.pssm2015-04-17 17:30 24KPSIBLAST PSSM for Jnet
[TXT]jp_e48tIqG.results.html2016-02-15 12:18 55KJPred results page
[TXT]jp_e48tIqG.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_e48tIqG.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_e48tIqG.seq2015-04-17 16:43 126 Sequence data file
[TXT]jp_e48tIqG.simple.html2015-04-17 17:30 1.2KBrief HTML: sequence and prediction only
[TXT]jp_e48tIqG.svg.html2015-04-17 17:30 47KJalview SVG summary of results
[ ]jp_e48tIqG.tar.gz2015-04-17 17:30 103KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.