A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:31 | 4.7K | JPred server log file |
| README | 2016-02-15 12:18 | 2.1K | Results file descriptions |
| d1sknp_.name | 2015-04-17 18:32 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_QKBALs_.align | 2015-04-17 20:30 | 14K | PSIBLAST alignment in FASTA format |
| jp_QKBALs_.als | 2015-04-17 20:30 | 1.9K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_QKBALs_.blast.gz | 2015-04-17 20:30 | 97K | Compressed PSIBLAST output file |
| jp_QKBALs_.coils.csv | 2015-04-17 20:30 | 474 | COILS output in CSV format |
| jp_QKBALs_.coilseq.lupas_14 | 2015-04-17 20:30 | 3.1K | COILS output, window length 14 |
| jp_QKBALs_.coilseq.lupas_21 | 2015-04-17 20:30 | 3.1K | COILS output, window length 21 |
| jp_QKBALs_.coilseq.lupas_28 | 2015-04-17 20:30 | 3.1K | COILS output, window length 28 |
| jp_QKBALs_.concise | 2015-04-17 20:30 | 29K | Prediction: coiled-coil, solvent, alignment |
| jp_QKBALs_.concise.blc | 2015-04-17 20:30 | 15K | BLC format prediction and alignment data |
| jp_QKBALs_.concise.fasta | 2015-04-17 20:30 | 15K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_QKBALs_.concise.pdf | 2015-04-17 20:30 | 83K | PDF prediction and alignment data |
| jp_QKBALs_.concise.ps | 2015-04-17 20:30 | 1.6M | Prediction: coiled-coil, solvent, alignment |
| jp_QKBALs_.fasta | 2015-04-17 20:26 | 88 | Input query sequence in FASTA format |
| jp_QKBALs_.full_MSA.fasta | 2015-04-17 20:30 | 125K | Full MSA before JPred filters in FASTA |
| jp_QKBALs_.full_MSA.fasta.noGaps.html | 2015-04-17 20:30 | 181K | Full MSA before JPred filters in FASTA |
| jp_QKBALs_.full_MSA.fasta.withGaps.html | 2015-04-17 20:30 | 568K | Full MSA before JPred filters in FASTA |
| jp_QKBALs_.hmm | 2015-04-17 20:30 | 14K | HHMer2 profile of the alignment |
| jp_QKBALs_.html | 2015-04-17 20:30 | 52K | HTML prediction and alignment data |
| jp_QKBALs_.input | 2015-04-17 18:32 | 81 | Raw input data for analysis |
| jp_QKBALs_.jalview | 2015-04-17 20:30 | 2.3K | Jalview annotation file for alignment |
| jp_QKBALs_.jnet | 2015-04-17 20:30 | 2.8K | Jnet secondary structure output |
| jp_QKBALs_.profile | 2015-04-17 20:29 | 12K | PSIBLAST profile from alignment |
| jp_QKBALs_.pssm | 2015-04-17 20:30 | 16K | PSIBLAST PSSM for Jnet |
| jp_QKBALs_.results.html | 2016-02-15 12:18 | 41K | JPred results page |
| jp_QKBALs_.results_jalview.html | 2016-02-24 17:17 | 13K | Jalview results options |
| jp_QKBALs_.results_jalview_app.html | 2016-02-24 17:17 | 16K | HTML prediction and alignment data |
| jp_QKBALs_.seq | 2015-04-17 18:32 | 88 | Sequence data file |
| jp_QKBALs_.simple.html | 2015-04-17 20:30 | 1.1K | Brief HTML: sequence and prediction only |
![[TXT]](jp_QKBALs_.svg.html) | jp_QKBALs_.svg.html | 2015-04-17 20:31 | 33K | Jalview SVG summary of results |
| jp_QKBALs_.tar.gz | 2015-04-17 20:31 | 268K | Archive containing complete results |
