JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:34 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1sr8a_.name2015-04-17 17:56 0 Job name flag file
[ ]jp_oJDHxXD.align2015-04-17 19:34 265KPSIBLAST alignment in FASTA format
[TXT]jp_oJDHxXD.als2015-04-17 19:34 5.0KAlscript command file for PS/PDF output
[ ]jp_oJDHxXD.blast.gz2015-04-17 19:33 1.5MCompressed PSIBLAST output file
[TXT]jp_oJDHxXD.coils.csv2015-04-17 19:34 1.7KCOILS output in CSV format
[ ]jp_oJDHxXD.coilseq.lupas_142015-04-17 19:34 12KCOILS output, window length 14
[ ]jp_oJDHxXD.coilseq.lupas_212015-04-17 19:34 12KCOILS output, window length 21
[ ]jp_oJDHxXD.coilseq.lupas_282015-04-17 19:34 12KCOILS output, window length 28
[ ]jp_oJDHxXD.concise2015-04-17 19:34 527KPrediction: coiled-coil, solvent, alignment
[ ]jp_oJDHxXD.concise.blc2015-04-17 19:34 266KBLC format prediction and alignment data
[ ]jp_oJDHxXD.concise.fasta2015-04-17 19:34 268KPrediction: coiled-coil, solvent, alignment
[ ]jp_oJDHxXD.concise.pdf2015-04-17 19:34 1.8MPDF prediction and alignment data
[ ]jp_oJDHxXD.concise.ps2015-04-17 19:34 33MPrediction: coiled-coil, solvent, alignment
[ ]jp_oJDHxXD.fasta2015-04-17 19:28 298 Input query sequence in FASTA format
[ ]jp_oJDHxXD.full_MSA.fasta2015-04-17 19:33 2.7MFull MSA before JPred filters in FASTA
[TXT]jp_oJDHxXD.full_MSA.fasta.noGaps.html2015-04-17 19:34 488KFull MSA before JPred filters in FASTA
[TXT]jp_oJDHxXD.full_MSA.fasta.withGaps.html2015-04-17 19:34 8.2MFull MSA before JPred filters in FASTA
[ ]jp_oJDHxXD.hmm2015-04-17 19:34 53KHHMer2 profile of the alignment
[TXT]jp_oJDHxXD.html2015-04-17 19:34 462KHTML prediction and alignment data
[ ]jp_oJDHxXD.input2015-04-17 17:56 289 Raw input data for analysis
[ ]jp_oJDHxXD.jalview2015-04-17 19:34 6.5KJalview annotation file for alignment
[ ]jp_oJDHxXD.jnet2015-04-17 19:34 10KJnet secondary structure output
[TXT]jp_oJDHxXD.profile2015-04-17 19:32 45KPSIBLAST profile from alignment
[ ]jp_oJDHxXD.pssm2015-04-17 19:34 61KPSIBLAST PSSM for Jnet
[TXT]jp_oJDHxXD.results.html2016-02-15 12:18 125KJPred results page
[TXT]jp_oJDHxXD.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_oJDHxXD.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_oJDHxXD.seq2015-04-17 17:56 298 Sequence data file
[TXT]jp_oJDHxXD.simple.html2015-04-17 19:34 2.1KBrief HTML: sequence and prediction only
[TXT]jp_oJDHxXD.svg.html2015-04-17 19:34 117KJalview SVG summary of results
[ ]jp_oJDHxXD.tar.gz2015-04-17 19:34 4.4MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.