JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:32 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1szha_.name2015-04-17 17:57 0 Job name flag file
[ ]jp_GHr349U.align2015-04-17 19:32 2.3KPSIBLAST alignment in FASTA format
[TXT]jp_GHr349U.als2015-04-17 19:32 2.5KAlscript command file for PS/PDF output
[ ]jp_GHr349U.blast.gz2015-04-17 19:32 4.3KCompressed PSIBLAST output file
[TXT]jp_GHr349U.coils.csv2015-04-17 19:32 912 COILS output in CSV format
[ ]jp_GHr349U.coilseq.lupas_142015-04-17 19:32 6.2KCOILS output, window length 14
[ ]jp_GHr349U.coilseq.lupas_212015-04-17 19:32 6.2KCOILS output, window length 21
[ ]jp_GHr349U.coilseq.lupas_282015-04-17 19:32 6.2KCOILS output, window length 28
[ ]jp_GHr349U.concise2015-04-17 19:32 11KPrediction: coiled-coil, solvent, alignment
[ ]jp_GHr349U.concise.blc2015-04-17 19:32 4.5KBLC format prediction and alignment data
[ ]jp_GHr349U.concise.fasta2015-04-17 19:32 3.8KPrediction: coiled-coil, solvent, alignment
[ ]jp_GHr349U.concise.pdf2015-04-17 19:32 30KPDF prediction and alignment data
[ ]jp_GHr349U.concise.ps2015-04-17 19:32 521KPrediction: coiled-coil, solvent, alignment
[ ]jp_GHr349U.fasta2015-04-17 19:28 162 Input query sequence in FASTA format
[ ]jp_GHr349U.full_MSA.fasta2015-04-17 19:32 3.2KFull MSA before JPred filters in FASTA
[TXT]jp_GHr349U.full_MSA.fasta.noGaps.html2015-04-17 19:32 5.2KFull MSA before JPred filters in FASTA
[TXT]jp_GHr349U.full_MSA.fasta.withGaps.html2015-04-17 19:32 7.5KFull MSA before JPred filters in FASTA
[ ]jp_GHr349U.hmm2015-04-17 19:32 28KHHMer2 profile of the alignment
[TXT]jp_GHr349U.html2015-04-17 19:32 18KHTML prediction and alignment data
[ ]jp_GHr349U.input2015-04-17 17:57 154 Raw input data for analysis
[ ]jp_GHr349U.jalview2015-04-17 19:32 3.8KJalview annotation file for alignment
[ ]jp_GHr349U.jnet2015-04-17 19:32 5.4KJnet secondary structure output
[TXT]jp_GHr349U.profile2015-04-17 19:31 24KPSIBLAST profile from alignment
[ ]jp_GHr349U.pssm2015-04-17 19:32 32KPSIBLAST PSSM for Jnet
[TXT]jp_GHr349U.results.html2016-02-15 12:18 69KJPred results page
[TXT]jp_GHr349U.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_GHr349U.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_GHr349U.seq2015-04-17 17:57 162 Sequence data file
[TXT]jp_GHr349U.simple.html2015-04-17 19:32 1.4KBrief HTML: sequence and prediction only
[TXT]jp_GHr349U.svg.html2015-04-17 19:32 61KJalview SVG summary of results
[ ]jp_GHr349U.tar.gz2015-04-17 19:32 76KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.