JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:48 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1tjxa_.name2015-04-17 17:57 0 Job name flag file
[ ]jp_QKMSluB.align2015-04-17 19:47 109KPSIBLAST alignment in FASTA format
[TXT]jp_QKMSluB.als2015-04-17 19:47 2.6KAlscript command file for PS/PDF output
[ ]jp_QKMSluB.blast.gz2015-04-17 19:44 18MCompressed PSIBLAST output file
[TXT]jp_QKMSluB.coils.csv2015-04-17 19:47 966 COILS output in CSV format
[ ]jp_QKMSluB.coilseq.lupas_142015-04-17 19:47 6.6KCOILS output, window length 14
[ ]jp_QKMSluB.coilseq.lupas_212015-04-17 19:47 6.6KCOILS output, window length 21
[ ]jp_QKMSluB.coilseq.lupas_282015-04-17 19:47 6.6KCOILS output, window length 28
[ ]jp_QKMSluB.concise2015-04-17 19:47 215KPrediction: coiled-coil, solvent, alignment
[ ]jp_QKMSluB.concise.blc2015-04-17 19:47 110KBLC format prediction and alignment data
[ ]jp_QKMSluB.concise.fasta2015-04-17 19:47 111KPrediction: coiled-coil, solvent, alignment
[ ]jp_QKMSluB.concise.pdf2015-04-17 19:47 712KPDF prediction and alignment data
[ ]jp_QKMSluB.concise.ps2015-04-17 19:47 13MPrediction: coiled-coil, solvent, alignment
[ ]jp_QKMSluB.fasta2015-04-17 19:29 171 Input query sequence in FASTA format
[ ]jp_QKMSluB.full_MSA.fasta2015-04-17 19:46 37MFull MSA before JPred filters in FASTA
[TXT]jp_QKMSluB.full_MSA.fasta.noGaps.html2015-04-17 19:48 4.1MFull MSA before JPred filters in FASTA
[TXT]jp_QKMSluB.full_MSA.fasta.withGaps.html2015-04-17 19:48 90MFull MSA before JPred filters in FASTA
[ ]jp_QKMSluB.hmm2015-04-17 19:47 29KHHMer2 profile of the alignment
[TXT]jp_QKMSluB.html2015-04-17 19:47 243KHTML prediction and alignment data
[ ]jp_QKMSluB.input2015-04-17 17:57 163 Raw input data for analysis
[ ]jp_QKMSluB.jalview2015-04-17 19:47 3.9KJalview annotation file for alignment
[ ]jp_QKMSluB.jnet2015-04-17 19:47 5.7KJnet secondary structure output
[TXT]jp_QKMSluB.profile2015-04-17 19:40 25KPSIBLAST profile from alignment
[ ]jp_QKMSluB.pssm2015-04-17 19:47 34KPSIBLAST PSSM for Jnet
[TXT]jp_QKMSluB.results.html2016-02-15 12:18 70KJPred results page
[TXT]jp_QKMSluB.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_QKMSluB.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_QKMSluB.seq2015-04-17 17:57 171 Sequence data file
[TXT]jp_QKMSluB.simple.html2015-04-17 19:47 1.4KBrief HTML: sequence and prediction only
[TXT]jp_QKMSluB.svg.html2015-04-17 19:48 62KJalview SVG summary of results
[ ]jp_QKMSluB.tar.gz2015-04-17 19:48 26MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.