JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:34 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1tkea1.name2015-04-17 16:43 0 Job name flag file
[ ]jp_EbhpJci.align2015-04-17 17:33 50KPSIBLAST alignment in FASTA format
[TXT]jp_EbhpJci.als2015-04-17 17:33 2.3KAlscript command file for PS/PDF output
[ ]jp_EbhpJci.blast.gz2015-04-17 17:33 1.3MCompressed PSIBLAST output file
[TXT]jp_EbhpJci.coils.csv2015-04-17 17:33 402 COILS output in CSV format
[ ]jp_EbhpJci.coilseq.lupas_142015-04-17 17:33 2.6KCOILS output, window length 14
[ ]jp_EbhpJci.coilseq.lupas_212015-04-17 17:33 2.6KCOILS output, window length 21
[ ]jp_EbhpJci.coilseq.lupas_282015-04-17 17:33 2.6KCOILS output, window length 28
[ ]jp_EbhpJci.concise2015-04-17 17:33 95KPrediction: coiled-coil, solvent, alignment
[ ]jp_EbhpJci.concise.blc2015-04-17 17:33 50KBLC format prediction and alignment data
[ ]jp_EbhpJci.concise.fasta2015-04-17 17:33 51KPrediction: coiled-coil, solvent, alignment
[ ]jp_EbhpJci.concise.pdf2015-04-17 17:33 320KPDF prediction and alignment data
[ ]jp_EbhpJci.concise.ps2015-04-17 17:33 5.4MPrediction: coiled-coil, solvent, alignment
[ ]jp_EbhpJci.fasta2015-04-17 17:28 75 Input query sequence in FASTA format
[ ]jp_EbhpJci.full_MSA.fasta2015-04-17 17:33 3.2MFull MSA before JPred filters in FASTA
[TXT]jp_EbhpJci.full_MSA.fasta.noGaps.html2015-04-17 17:33 1.2MFull MSA before JPred filters in FASTA
[TXT]jp_EbhpJci.full_MSA.fasta.withGaps.html2015-04-17 17:33 11MFull MSA before JPred filters in FASTA
[ ]jp_EbhpJci.hmm2015-04-17 17:33 12KHHMer2 profile of the alignment
[TXT]jp_EbhpJci.html2015-04-17 17:33 178KHTML prediction and alignment data
[ ]jp_EbhpJci.input2015-04-17 16:43 69 Raw input data for analysis
[ ]jp_EbhpJci.jalview2015-04-17 17:33 2.1KJalview annotation file for alignment
[ ]jp_EbhpJci.jnet2015-04-17 17:33 2.4KJnet secondary structure output
[TXT]jp_EbhpJci.profile2015-04-17 17:31 10KPSIBLAST profile from alignment
[ ]jp_EbhpJci.pssm2015-04-17 17:33 13KPSIBLAST PSSM for Jnet
[TXT]jp_EbhpJci.results.html2016-02-15 12:18 37KJPred results page
[TXT]jp_EbhpJci.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_EbhpJci.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_EbhpJci.seq2015-04-17 16:43 75 Sequence data file
[TXT]jp_EbhpJci.simple.html2015-04-17 17:33 1.2KBrief HTML: sequence and prediction only
[TXT]jp_EbhpJci.svg.html2015-04-17 17:34 29KJalview SVG summary of results
[ ]jp_EbhpJci.tar.gz2015-04-17 17:34 2.7MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.