JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:38 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1tkea2.name2015-04-17 16:07 0 Job name flag file
[ ]jp_RtgThar.align2015-04-17 16:38 136KPSIBLAST alignment in FASTA format
[TXT]jp_RtgThar.als2015-04-17 16:38 3.0KAlscript command file for PS/PDF output
[ ]jp_RtgThar.blast.gz2015-04-17 16:37 5.6MCompressed PSIBLAST output file
[TXT]jp_RtgThar.coils.csv2015-04-17 16:38 1.0KCOILS output in CSV format
[ ]jp_RtgThar.coilseq.lupas_142015-04-17 16:38 6.8KCOILS output, window length 14
[ ]jp_RtgThar.coilseq.lupas_212015-04-17 16:38 6.8KCOILS output, window length 21
[ ]jp_RtgThar.coilseq.lupas_282015-04-17 16:38 6.8KCOILS output, window length 28
[ ]jp_RtgThar.concise2015-04-17 16:38 268KPrediction: coiled-coil, solvent, alignment
[ ]jp_RtgThar.concise.blc2015-04-17 16:38 137KBLC format prediction and alignment data
[ ]jp_RtgThar.concise.fasta2015-04-17 16:38 138KPrediction: coiled-coil, solvent, alignment
[ ]jp_RtgThar.concise.pdf2015-04-17 16:38 906KPDF prediction and alignment data
[ ]jp_RtgThar.concise.ps2015-04-17 16:38 16MPrediction: coiled-coil, solvent, alignment
[ ]jp_RtgThar.fasta2015-04-17 16:32 177 Input query sequence in FASTA format
[ ]jp_RtgThar.full_MSA.fasta2015-04-17 16:37 13MFull MSA before JPred filters in FASTA
[TXT]jp_RtgThar.full_MSA.fasta.noGaps.html2015-04-17 16:38 2.3MFull MSA before JPred filters in FASTA
[TXT]jp_RtgThar.full_MSA.fasta.withGaps.html2015-04-17 16:38 42MFull MSA before JPred filters in FASTA
[ ]jp_RtgThar.hmm2015-04-17 16:38 30KHHMer2 profile of the alignment
[TXT]jp_RtgThar.html2015-04-17 16:38 299KHTML prediction and alignment data
[ ]jp_RtgThar.input2015-04-17 16:07 169 Raw input data for analysis
[ ]jp_RtgThar.jalview2015-04-17 16:38 4.1KJalview annotation file for alignment
[ ]jp_RtgThar.jnet2015-04-17 16:38 6.0KJnet secondary structure output
[TXT]jp_RtgThar.profile2015-04-17 16:36 26KPSIBLAST profile from alignment
[ ]jp_RtgThar.pssm2015-04-17 16:38 35KPSIBLAST PSSM for Jnet
[TXT]jp_RtgThar.results.html2016-02-15 12:18 75KJPred results page
[TXT]jp_RtgThar.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_RtgThar.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_RtgThar.seq2015-04-17 16:07 177 Sequence data file
[TXT]jp_RtgThar.simple.html2015-04-17 16:38 1.5KBrief HTML: sequence and prediction only
[TXT]jp_RtgThar.svg.html2015-04-17 16:38 67KJalview SVG summary of results
[ ]jp_RtgThar.tar.gz2015-04-17 16:39 10MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.