JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:33 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1twff_.name2015-04-17 16:44 0 Job name flag file
[ ]jp_pxsLjQx.align2015-04-17 17:33 23KPSIBLAST alignment in FASTA format
[TXT]jp_pxsLjQx.als2015-04-17 17:33 1.9KAlscript command file for PS/PDF output
[ ]jp_pxsLjQx.blast.gz2015-04-17 17:33 158KCompressed PSIBLAST output file
[TXT]jp_pxsLjQx.coils.csv2015-04-17 17:33 534 COILS output in CSV format
[ ]jp_pxsLjQx.coilseq.lupas_142015-04-17 17:33 3.5KCOILS output, window length 14
[ ]jp_pxsLjQx.coilseq.lupas_212015-04-17 17:33 3.5KCOILS output, window length 21
[ ]jp_pxsLjQx.coilseq.lupas_282015-04-17 17:33 3.5KCOILS output, window length 28
[ ]jp_pxsLjQx.concise2015-04-17 17:33 46KPrediction: coiled-coil, solvent, alignment
[ ]jp_pxsLjQx.concise.blc2015-04-17 17:33 23KBLC format prediction and alignment data
[ ]jp_pxsLjQx.concise.fasta2015-04-17 17:33 23KPrediction: coiled-coil, solvent, alignment
[ ]jp_pxsLjQx.concise.pdf2015-04-17 17:33 142KPDF prediction and alignment data
[ ]jp_pxsLjQx.concise.ps2015-04-17 17:33 2.5MPrediction: coiled-coil, solvent, alignment
[ ]jp_pxsLjQx.fasta2015-04-17 17:29 98 Input query sequence in FASTA format
[ ]jp_pxsLjQx.full_MSA.fasta2015-04-17 17:33 213KFull MSA before JPred filters in FASTA
[TXT]jp_pxsLjQx.full_MSA.fasta.noGaps.html2015-04-17 17:33 124KFull MSA before JPred filters in FASTA
[TXT]jp_pxsLjQx.full_MSA.fasta.withGaps.html2015-04-17 17:33 657KFull MSA before JPred filters in FASTA
[ ]jp_pxsLjQx.hmm2015-04-17 17:33 16KHHMer2 profile of the alignment
[TXT]jp_pxsLjQx.html2015-04-17 17:33 75KHTML prediction and alignment data
[ ]jp_pxsLjQx.input2015-04-17 16:44 91 Raw input data for analysis
[ ]jp_pxsLjQx.jalview2015-04-17 17:33 2.5KJalview annotation file for alignment
[ ]jp_pxsLjQx.jnet2015-04-17 17:33 3.1KJnet secondary structure output
[TXT]jp_pxsLjQx.profile2015-04-17 17:32 14KPSIBLAST profile from alignment
[ ]jp_pxsLjQx.pssm2015-04-17 17:33 18KPSIBLAST PSSM for Jnet
[TXT]jp_pxsLjQx.results.html2016-02-15 12:18 43KJPred results page
[TXT]jp_pxsLjQx.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_pxsLjQx.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_pxsLjQx.seq2015-04-17 16:44 98 Sequence data file
[TXT]jp_pxsLjQx.simple.html2015-04-17 17:33 1.1KBrief HTML: sequence and prediction only
[TXT]jp_pxsLjQx.svg.html2015-04-17 17:33 35KJalview SVG summary of results
[ ]jp_pxsLjQx.tar.gz2015-04-17 17:33 399KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.