JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:09 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1u2ha_.name2015-04-17 16:08 0 Job name flag file
[ ]jp_amAiS6a.align2015-04-17 17:04 100KPSIBLAST alignment in FASTA format
[TXT]jp_amAiS6a.als2015-04-17 17:04 2.4KAlscript command file for PS/PDF output
[ ]jp_amAiS6a.blast.gz2015-04-17 16:55 59MCompressed PSIBLAST output file
[TXT]jp_amAiS6a.coils.csv2015-04-17 17:04 606 COILS output in CSV format
[ ]jp_amAiS6a.coilseq.lupas_142015-04-17 17:04 4.0KCOILS output, window length 14
[ ]jp_amAiS6a.coilseq.lupas_212015-04-17 17:04 4.0KCOILS output, window length 21
[ ]jp_amAiS6a.coilseq.lupas_282015-04-17 17:04 4.0KCOILS output, window length 28
[ ]jp_amAiS6a.concise2015-04-17 17:04 190KPrediction: coiled-coil, solvent, alignment
[ ]jp_amAiS6a.concise.blc2015-04-17 17:04 100KBLC format prediction and alignment data
[ ]jp_amAiS6a.concise.fasta2015-04-17 17:04 101KPrediction: coiled-coil, solvent, alignment
[ ]jp_amAiS6a.concise.pdf2015-04-17 17:05 652KPDF prediction and alignment data
[ ]jp_amAiS6a.concise.ps2015-04-17 17:04 11MPrediction: coiled-coil, solvent, alignment
[ ]jp_amAiS6a.fasta2015-04-17 16:32 110 Input query sequence in FASTA format
[ ]jp_amAiS6a.full_MSA.fasta2015-04-17 17:02 180MFull MSA before JPred filters in FASTA
[TXT]jp_amAiS6a.full_MSA.fasta.noGaps.html2015-04-17 17:08 20MFull MSA before JPred filters in FASTA
[TXT]jp_amAiS6a.full_MSA.fasta.withGaps.html2015-04-17 17:08 384MFull MSA before JPred filters in FASTA
[ ]jp_amAiS6a.hmm2015-04-17 17:04 18KHHMer2 profile of the alignment
[TXT]jp_amAiS6a.html2015-04-17 17:04 274KHTML prediction and alignment data
[ ]jp_amAiS6a.input2015-04-17 16:08 103 Raw input data for analysis
[ ]jp_amAiS6a.jalview2015-04-17 17:04 2.8KJalview annotation file for alignment
[ ]jp_amAiS6a.jnet2015-04-17 17:04 3.6KJnet secondary structure output
[TXT]jp_amAiS6a.profile2015-04-17 16:52 16KPSIBLAST profile from alignment
[ ]jp_amAiS6a.pssm2015-04-17 17:04 21KPSIBLAST PSSM for Jnet
[TXT]jp_amAiS6a.results.html2016-02-15 12:18 48KJPred results page
[TXT]jp_amAiS6a.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_amAiS6a.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_amAiS6a.seq2015-04-17 16:08 110 Sequence data file
[TXT]jp_amAiS6a.simple.html2015-04-17 17:04 1.3KBrief HTML: sequence and prediction only
[TXT]jp_amAiS6a.svg.html2015-04-17 17:09 40KJalview SVG summary of results
[ ]jp_amAiS6a.tar.gz2015-04-17 17:09 95MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.