JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:36 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1u6ka_.name2015-04-17 17:58 0 Job name flag file
[ ]jp_PwcFOWI.align2015-04-17 19:35 7.4KPSIBLAST alignment in FASTA format
[TXT]jp_PwcFOWI.als2015-04-17 19:35 4.1KAlscript command file for PS/PDF output
[ ]jp_PwcFOWI.blast.gz2015-04-17 19:35 24KCompressed PSIBLAST output file
[TXT]jp_PwcFOWI.coils.csv2015-04-17 19:35 1.7KCOILS output in CSV format
[ ]jp_PwcFOWI.coilseq.lupas_142015-04-17 19:35 12KCOILS output, window length 14
[ ]jp_PwcFOWI.coilseq.lupas_212015-04-17 19:35 12KCOILS output, window length 21
[ ]jp_PwcFOWI.coilseq.lupas_282015-04-17 19:35 12KCOILS output, window length 28
[ ]jp_PwcFOWI.concise2015-04-17 19:35 26KPrediction: coiled-coil, solvent, alignment
[ ]jp_PwcFOWI.concise.blc2015-04-17 19:35 12KBLC format prediction and alignment data
[ ]jp_PwcFOWI.concise.fasta2015-04-17 19:35 10KPrediction: coiled-coil, solvent, alignment
[ ]jp_PwcFOWI.concise.pdf2015-04-17 19:35 77KPDF prediction and alignment data
[ ]jp_PwcFOWI.concise.ps2015-04-17 19:35 1.4MPrediction: coiled-coil, solvent, alignment
[ ]jp_PwcFOWI.fasta2015-04-17 19:31 298 Input query sequence in FASTA format
[ ]jp_PwcFOWI.full_MSA.fasta2015-04-17 19:35 20KFull MSA before JPred filters in FASTA
[TXT]jp_PwcFOWI.full_MSA.fasta.noGaps.html2015-04-17 19:35 24KFull MSA before JPred filters in FASTA
[TXT]jp_PwcFOWI.full_MSA.fasta.withGaps.html2015-04-17 19:35 52KFull MSA before JPred filters in FASTA
[ ]jp_PwcFOWI.hmm2015-04-17 19:35 53KHHMer2 profile of the alignment
[TXT]jp_PwcFOWI.html2015-04-17 19:35 44KHTML prediction and alignment data
[ ]jp_PwcFOWI.input2015-04-17 17:58 289 Raw input data for analysis
[ ]jp_PwcFOWI.jalview2015-04-17 19:35 6.6KJalview annotation file for alignment
[ ]jp_PwcFOWI.jnet2015-04-17 19:35 10KJnet secondary structure output
[TXT]jp_PwcFOWI.profile2015-04-17 19:34 45KPSIBLAST profile from alignment
[ ]jp_PwcFOWI.pssm2015-04-17 19:35 61KPSIBLAST PSSM for Jnet
[TXT]jp_PwcFOWI.results.html2016-02-15 12:18 123KJPred results page
[TXT]jp_PwcFOWI.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_PwcFOWI.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_PwcFOWI.seq2015-04-17 17:58 298 Sequence data file
[TXT]jp_PwcFOWI.simple.html2015-04-17 19:35 1.9KBrief HTML: sequence and prediction only
[TXT]jp_PwcFOWI.svg.html2015-04-17 19:36 114KJalview SVG summary of results
[ ]jp_PwcFOWI.tar.gz2015-04-17 19:36 185KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.