JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:34 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1u84a_.name2015-04-17 16:44 0 Job name flag file
[ ]jp_O0OGKkf.align2015-04-17 17:34 6.8KPSIBLAST alignment in FASTA format
[TXT]jp_O0OGKkf.als2015-04-17 17:34 1.7KAlscript command file for PS/PDF output
[ ]jp_O0OGKkf.blast.gz2015-04-17 17:34 14KCompressed PSIBLAST output file
[TXT]jp_O0OGKkf.coils.csv2015-04-17 17:34 516 COILS output in CSV format
[ ]jp_O0OGKkf.coilseq.lupas_142015-04-17 17:34 3.4KCOILS output, window length 14
[ ]jp_O0OGKkf.coilseq.lupas_212015-04-17 17:34 3.4KCOILS output, window length 21
[ ]jp_O0OGKkf.coilseq.lupas_282015-04-17 17:34 3.4KCOILS output, window length 28
[ ]jp_O0OGKkf.concise2015-04-17 17:34 16KPrediction: coiled-coil, solvent, alignment
[ ]jp_O0OGKkf.concise.blc2015-04-17 17:34 8.0KBLC format prediction and alignment data
[ ]jp_O0OGKkf.concise.fasta2015-04-17 17:34 7.7KPrediction: coiled-coil, solvent, alignment
[ ]jp_O0OGKkf.concise.pdf2015-04-17 17:34 51KPDF prediction and alignment data
[ ]jp_O0OGKkf.concise.ps2015-04-17 17:34 894KPrediction: coiled-coil, solvent, alignment
[ ]jp_O0OGKkf.fasta2015-04-17 17:30 95 Input query sequence in FASTA format
[ ]jp_O0OGKkf.full_MSA.fasta2015-04-17 17:34 14KFull MSA before JPred filters in FASTA
[TXT]jp_O0OGKkf.full_MSA.fasta.noGaps.html2015-04-17 17:34 20KFull MSA before JPred filters in FASTA
[TXT]jp_O0OGKkf.full_MSA.fasta.withGaps.html2015-04-17 17:34 69KFull MSA before JPred filters in FASTA
[ ]jp_O0OGKkf.hmm2015-04-17 17:34 15KHHMer2 profile of the alignment
[TXT]jp_O0OGKkf.html2015-04-17 17:34 30KHTML prediction and alignment data
[ ]jp_O0OGKkf.input2015-04-17 16:44 88 Raw input data for analysis
[ ]jp_O0OGKkf.jalview2015-04-17 17:34 2.5KJalview annotation file for alignment
[ ]jp_O0OGKkf.jnet2015-04-17 17:34 3.0KJnet secondary structure output
[TXT]jp_O0OGKkf.profile2015-04-17 17:32 13KPSIBLAST profile from alignment
[ ]jp_O0OGKkf.pssm2015-04-17 17:34 17KPSIBLAST PSSM for Jnet
[TXT]jp_O0OGKkf.results.html2016-02-15 12:18 42KJPred results page
[TXT]jp_O0OGKkf.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_O0OGKkf.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_O0OGKkf.seq2015-04-17 16:44 95 Sequence data file
[TXT]jp_O0OGKkf.simple.html2015-04-17 17:34 1.1KBrief HTML: sequence and prediction only
[TXT]jp_O0OGKkf.svg.html2015-04-17 17:34 34KJalview SVG summary of results
[ ]jp_O0OGKkf.tar.gz2015-04-17 17:34 111KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.