JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:33 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1u94a2.name2015-04-17 16:44 0 Job name flag file
[ ]jp_w5HBGfJ.align2015-04-17 17:33 67KPSIBLAST alignment in FASTA format
[TXT]jp_w5HBGfJ.als2015-04-17 17:33 2.0KAlscript command file for PS/PDF output
[ ]jp_w5HBGfJ.blast.gz2015-04-17 17:32 478KCompressed PSIBLAST output file
[TXT]jp_w5HBGfJ.coils.csv2015-04-17 17:33 390 COILS output in CSV format
[ ]jp_w5HBGfJ.coilseq.lupas_142015-04-17 17:33 2.5KCOILS output, window length 14
[ ]jp_w5HBGfJ.coilseq.lupas_212015-04-17 17:33 2.5KCOILS output, window length 21
[ ]jp_w5HBGfJ.coilseq.lupas_282015-04-17 17:33 2.5KCOILS output, window length 28
[ ]jp_w5HBGfJ.concise2015-04-17 17:33 127KPrediction: coiled-coil, solvent, alignment
[ ]jp_w5HBGfJ.concise.blc2015-04-17 17:33 67KBLC format prediction and alignment data
[ ]jp_w5HBGfJ.concise.fasta2015-04-17 17:33 68KPrediction: coiled-coil, solvent, alignment
[ ]jp_w5HBGfJ.concise.pdf2015-04-17 17:33 361KPDF prediction and alignment data
[ ]jp_w5HBGfJ.concise.ps2015-04-17 17:33 6.9MPrediction: coiled-coil, solvent, alignment
[ ]jp_w5HBGfJ.fasta2015-04-17 17:30 73 Input query sequence in FASTA format
[ ]jp_w5HBGfJ.full_MSA.fasta2015-04-17 17:32 469KFull MSA before JPred filters in FASTA
[TXT]jp_w5HBGfJ.full_MSA.fasta.noGaps.html2015-04-17 17:33 506KFull MSA before JPred filters in FASTA
[TXT]jp_w5HBGfJ.full_MSA.fasta.withGaps.html2015-04-17 17:33 2.2MFull MSA before JPred filters in FASTA
[ ]jp_w5HBGfJ.hmm2015-04-17 17:33 11KHHMer2 profile of the alignment
[TXT]jp_w5HBGfJ.html2015-04-17 17:33 243KHTML prediction and alignment data
[ ]jp_w5HBGfJ.input2015-04-17 16:44 67 Raw input data for analysis
[ ]jp_w5HBGfJ.jalview2015-04-17 17:33 2.0KJalview annotation file for alignment
[ ]jp_w5HBGfJ.jnet2015-04-17 17:33 2.3KJnet secondary structure output
[TXT]jp_w5HBGfJ.profile2015-04-17 17:32 10KPSIBLAST profile from alignment
[ ]jp_w5HBGfJ.pssm2015-04-17 17:33 13KPSIBLAST PSSM for Jnet
[TXT]jp_w5HBGfJ.results.html2016-02-15 12:18 36KJPred results page
[TXT]jp_w5HBGfJ.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_w5HBGfJ.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_w5HBGfJ.seq2015-04-17 16:44 73 Sequence data file
[TXT]jp_w5HBGfJ.simple.html2015-04-17 17:33 1.1KBrief HTML: sequence and prediction only
[TXT]jp_w5HBGfJ.svg.html2015-04-17 17:33 28KJalview SVG summary of results
[ ]jp_w5HBGfJ.tar.gz2015-04-17 17:33 1.2MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.