JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:37 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1ucda_.name2015-04-17 18:34 0 Job name flag file
[ ]jp_mJR642D.align2015-04-17 20:37 180KPSIBLAST alignment in FASTA format
[TXT]jp_mJR642D.als2015-04-17 20:37 2.7KAlscript command file for PS/PDF output
[ ]jp_mJR642D.blast.gz2015-04-17 20:36 2.6MCompressed PSIBLAST output file
[TXT]jp_mJR642D.coils.csv2015-04-17 20:37 1.1KCOILS output in CSV format
[ ]jp_mJR642D.coilseq.lupas_142015-04-17 20:37 8.0KCOILS output, window length 14
[ ]jp_mJR642D.coilseq.lupas_212015-04-17 20:37 8.0KCOILS output, window length 21
[ ]jp_mJR642D.coilseq.lupas_282015-04-17 20:37 8.0KCOILS output, window length 28
[ ]jp_mJR642D.concise2015-04-17 20:37 355KPrediction: coiled-coil, solvent, alignment
[ ]jp_mJR642D.concise.blc2015-04-17 20:37 180KBLC format prediction and alignment data
[ ]jp_mJR642D.concise.fasta2015-04-17 20:37 182KPrediction: coiled-coil, solvent, alignment
[ ]jp_mJR642D.concise.pdf2015-04-17 20:37 1.2MPDF prediction and alignment data
[ ]jp_mJR642D.concise.ps2015-04-17 20:37 21MPrediction: coiled-coil, solvent, alignment
[ ]jp_mJR642D.fasta2015-04-17 20:30 205 Input query sequence in FASTA format
[ ]jp_mJR642D.full_MSA.fasta2015-04-17 20:36 4.5MFull MSA before JPred filters in FASTA
[TXT]jp_mJR642D.full_MSA.fasta.noGaps.html2015-04-17 20:37 700KFull MSA before JPred filters in FASTA
[TXT]jp_mJR642D.full_MSA.fasta.withGaps.html2015-04-17 20:37 13MFull MSA before JPred filters in FASTA
[ ]jp_mJR642D.hmm2015-04-17 20:37 36KHHMer2 profile of the alignment
[TXT]jp_mJR642D.html2015-04-17 20:37 363KHTML prediction and alignment data
[ ]jp_mJR642D.input2015-04-17 18:34 197 Raw input data for analysis
[ ]jp_mJR642D.jalview2015-04-17 20:37 4.6KJalview annotation file for alignment
[ ]jp_mJR642D.jnet2015-04-17 20:37 7.0KJnet secondary structure output
[TXT]jp_mJR642D.profile2015-04-17 20:34 31KPSIBLAST profile from alignment
[ ]jp_mJR642D.pssm2015-04-17 20:37 41KPSIBLAST PSSM for Jnet
[TXT]jp_mJR642D.results.html2016-02-15 12:18 84KJPred results page
[TXT]jp_mJR642D.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_mJR642D.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_mJR642D.seq2015-04-17 18:34 205 Sequence data file
[TXT]jp_mJR642D.simple.html2015-04-17 20:37 1.5KBrief HTML: sequence and prediction only
[TXT]jp_mJR642D.svg.html2015-04-17 20:37 76KJalview SVG summary of results
[ ]jp_mJR642D.tar.gz2015-04-17 20:38 5.4MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.