JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:34 5.0KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1ugia_.name2015-04-17 16:44 0 Job name flag file
[ ]jp_hQaAkgw.align2015-04-17 17:34 194 PSIBLAST alignment in FASTA format
[TXT]jp_hQaAkgw.als2015-04-17 17:34 2.2KAlscript command file for PS/PDF output
[ ]jp_hQaAkgw.blast.gz2015-04-17 17:34 1.6KCompressed PSIBLAST output file
[TXT]jp_hQaAkgw.coils.csv2015-04-17 17:34 528 COILS output in CSV format
[ ]jp_hQaAkgw.coilseq.lupas_142015-04-17 17:34 3.5KCOILS output, window length 14
[ ]jp_hQaAkgw.coilseq.lupas_212015-04-17 17:34 3.5KCOILS output, window length 21
[ ]jp_hQaAkgw.coilseq.lupas_282015-04-17 17:34 3.5KCOILS output, window length 28
[ ]jp_hQaAkgw.concise2015-04-17 17:34 4.0KPrediction: coiled-coil, solvent, alignment
[ ]jp_hQaAkgw.concise.blc2015-04-17 17:34 1.5KBLC format prediction and alignment data
[ ]jp_hQaAkgw.concise.fasta2015-04-17 17:34 1.1KPrediction: coiled-coil, solvent, alignment
[ ]jp_hQaAkgw.concise.pdf2015-04-17 17:34 11KPDF prediction and alignment data
[ ]jp_hQaAkgw.concise.ps2015-04-17 17:34 164KPrediction: coiled-coil, solvent, alignment
[ ]jp_hQaAkgw.fasta2015-04-17 17:31 97 Input query sequence in FASTA format
[ ]jp_hQaAkgw.full_MSA.fasta2015-04-17 17:34 194 Full MSA before JPred filters in FASTA
[TXT]jp_hQaAkgw.full_MSA.fasta.noGaps.html2015-04-17 17:34 497 Full MSA before JPred filters in FASTA
[TXT]jp_hQaAkgw.full_MSA.fasta.withGaps.html2015-04-17 17:34 497 Full MSA before JPred filters in FASTA
[ ]jp_hQaAkgw.hmm2015-04-17 17:34 16KHHMer2 profile of the alignment
[TXT]jp_hQaAkgw.html2015-04-17 17:34 9.0KHTML prediction and alignment data
[ ]jp_hQaAkgw.input2015-04-17 16:44 90 Raw input data for analysis
[ ]jp_hQaAkgw.jalview2015-04-17 17:34 2.5KJalview annotation file for alignment
[ ]jp_hQaAkgw.jnet2015-04-17 17:34 3.1KJnet secondary structure output
[TXT]jp_hQaAkgw.profile2015-04-17 17:33 14KPSIBLAST profile from alignment
[ ]jp_hQaAkgw.pssm2015-04-17 17:34 18KPSIBLAST PSSM for Jnet
[TXT]jp_hQaAkgw.results.html2016-02-15 12:18 45KJPred results page
[TXT]jp_hQaAkgw.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_hQaAkgw.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_hQaAkgw.seq2015-04-17 16:44 97 Sequence data file
[TXT]jp_hQaAkgw.simple.html2015-04-17 17:34 1.2KBrief HTML: sequence and prediction only
[TXT]jp_hQaAkgw.svg.html2015-04-17 17:34 37KJalview SVG summary of results
[ ]jp_hQaAkgw.tar.gz2015-04-17 17:34 29KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.