JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:34 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1uj8a1.name2015-04-17 18:34 0 Job name flag file
[ ]jp_9Y1eUAk.align2015-04-17 20:34 15KPSIBLAST alignment in FASTA format
[TXT]jp_9Y1eUAk.als2015-04-17 20:34 1.8KAlscript command file for PS/PDF output
[ ]jp_9Y1eUAk.blast.gz2015-04-17 20:34 56KCompressed PSIBLAST output file
[TXT]jp_9Y1eUAk.coils.csv2015-04-17 20:34 414 COILS output in CSV format
[ ]jp_9Y1eUAk.coilseq.lupas_142015-04-17 20:34 2.7KCOILS output, window length 14
[ ]jp_9Y1eUAk.coilseq.lupas_212015-04-17 20:34 2.7KCOILS output, window length 21
[ ]jp_9Y1eUAk.coilseq.lupas_282015-04-17 20:34 2.7KCOILS output, window length 28
[ ]jp_9Y1eUAk.concise2015-04-17 20:34 30KPrediction: coiled-coil, solvent, alignment
[ ]jp_9Y1eUAk.concise.blc2015-04-17 20:34 16KBLC format prediction and alignment data
[ ]jp_9Y1eUAk.concise.fasta2015-04-17 20:34 16KPrediction: coiled-coil, solvent, alignment
[ ]jp_9Y1eUAk.concise.pdf2015-04-17 20:34 93KPDF prediction and alignment data
[ ]jp_9Y1eUAk.concise.ps2015-04-17 20:34 1.6MPrediction: coiled-coil, solvent, alignment
[ ]jp_9Y1eUAk.fasta2015-04-17 20:32 77 Input query sequence in FASTA format
[ ]jp_9Y1eUAk.full_MSA.fasta2015-04-17 20:34 41KFull MSA before JPred filters in FASTA
[TXT]jp_9Y1eUAk.full_MSA.fasta.noGaps.html2015-04-17 20:34 77KFull MSA before JPred filters in FASTA
[TXT]jp_9Y1eUAk.full_MSA.fasta.withGaps.html2015-04-17 20:34 143KFull MSA before JPred filters in FASTA
[ ]jp_9Y1eUAk.hmm2015-04-17 20:34 12KHHMer2 profile of the alignment
[TXT]jp_9Y1eUAk.html2015-04-17 20:34 57KHTML prediction and alignment data
[ ]jp_9Y1eUAk.input2015-04-17 18:34 71 Raw input data for analysis
[ ]jp_9Y1eUAk.jalview2015-04-17 20:34 2.1KJalview annotation file for alignment
[ ]jp_9Y1eUAk.jnet2015-04-17 20:34 2.4KJnet secondary structure output
[TXT]jp_9Y1eUAk.profile2015-04-17 20:33 11KPSIBLAST profile from alignment
[ ]jp_9Y1eUAk.pssm2015-04-17 20:34 14KPSIBLAST PSSM for Jnet
[TXT]jp_9Y1eUAk.results.html2016-02-15 12:18 36KJPred results page
[TXT]jp_9Y1eUAk.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_9Y1eUAk.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_9Y1eUAk.seq2015-04-17 18:34 77 Sequence data file
[TXT]jp_9Y1eUAk.simple.html2015-04-17 20:34 1.1KBrief HTML: sequence and prediction only
[TXT]jp_9Y1eUAk.svg.html2015-04-17 20:34 28KJalview SVG summary of results
[ ]jp_9Y1eUAk.tar.gz2015-04-17 20:34 216KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.