JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:37 4.8KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1uptb_.name2015-04-17 15:30 0 Job name flag file
[ ]jp_4mfU8y4.align2015-04-17 15:36 2.8KPSIBLAST alignment in FASTA format
[TXT]jp_4mfU8y4.als2015-04-17 15:36 1.7KAlscript command file for PS/PDF output
[ ]jp_4mfU8y4.blast.gz2015-04-17 15:36 23KCompressed PSIBLAST output file
[TXT]jp_4mfU8y4.coils.csv2015-04-17 15:36 378 COILS output in CSV format
[ ]jp_4mfU8y4.coilseq.lupas_142015-04-17 15:36 2.4KCOILS output, window length 14
[ ]jp_4mfU8y4.coilseq.lupas_212015-04-17 15:36 2.4KCOILS output, window length 21
[ ]jp_4mfU8y4.coilseq.lupas_282015-04-17 15:36 2.4KCOILS output, window length 28
[ ]jp_4mfU8y4.concise2015-04-17 15:36 7.7KPrediction: coiled-coil, solvent, alignment
[ ]jp_4mfU8y4.concise.blc2015-04-17 15:36 3.7KBLC format prediction and alignment data
[ ]jp_4mfU8y4.concise.fasta2015-04-17 15:36 3.4KPrediction: coiled-coil, solvent, alignment
[ ]jp_4mfU8y4.concise.pdf2015-04-17 15:36 2.2KPDF prediction and alignment data
[ ]jp_4mfU8y4.concise.ps2015-04-17 15:36 1.3KPrediction: coiled-coil, solvent, alignment
[ ]jp_4mfU8y4.fasta2015-04-17 15:33 71 Input query sequence in FASTA format
[ ]jp_4mfU8y4.full_MSA.fasta2015-04-17 15:36 19KFull MSA before JPred filters in FASTA
[TXT]jp_4mfU8y4.full_MSA.fasta.noGaps.html2015-04-17 15:36 33KFull MSA before JPred filters in FASTA
[TXT]jp_4mfU8y4.full_MSA.fasta.withGaps.html2015-04-17 15:36 85KFull MSA before JPred filters in FASTA
[ ]jp_4mfU8y4.hmm2015-04-17 15:36 11KHHMer2 profile of the alignment
[TXT]jp_4mfU8y4.html2015-04-17 15:36 17KHTML prediction and alignment data
[ ]jp_4mfU8y4.input2015-04-17 15:30 65 Raw input data for analysis
[ ]jp_4mfU8y4.jalview2015-04-17 15:36 2.0KJalview annotation file for alignment
[ ]jp_4mfU8y4.jnet2015-04-17 15:36 2.2KJnet secondary structure output
[TXT]jp_4mfU8y4.profile2015-04-17 15:35 9.7KPSIBLAST profile from alignment
[ ]jp_4mfU8y4.pssm2015-04-17 15:36 12KPSIBLAST PSSM for Jnet
[TXT]jp_4mfU8y4.results.html2016-02-15 12:18 34KJPred results page
[TXT]jp_4mfU8y4.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_4mfU8y4.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_4mfU8y4.seq2015-04-17 15:30 71 Sequence data file
[TXT]jp_4mfU8y4.simple.html2015-04-17 15:36 1.0KBrief HTML: sequence and prediction only
[TXT]jp_4mfU8y4.svg.html2015-04-17 15:37 26KJalview SVG summary of results
[ ]jp_4mfU8y4.tar.gz2015-04-17 15:37 64KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.