JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:38 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1usma_.name2015-04-17 15:30 0 Job name flag file
[ ]jp_05RkFMD.align2015-04-17 15:37 83KPSIBLAST alignment in FASTA format
[TXT]jp_05RkFMD.als2015-04-17 15:37 1.9KAlscript command file for PS/PDF output
[ ]jp_05RkFMD.blast.gz2015-04-17 15:37 782KCompressed PSIBLAST output file
[TXT]jp_05RkFMD.coils.csv2015-04-17 15:37 492 COILS output in CSV format
[ ]jp_05RkFMD.coilseq.lupas_142015-04-17 15:37 3.2KCOILS output, window length 14
[ ]jp_05RkFMD.coilseq.lupas_212015-04-17 15:37 3.2KCOILS output, window length 21
[ ]jp_05RkFMD.coilseq.lupas_282015-04-17 15:37 3.2KCOILS output, window length 28
[ ]jp_05RkFMD.concise2015-04-17 15:37 158KPrediction: coiled-coil, solvent, alignment
[ ]jp_05RkFMD.concise.blc2015-04-17 15:37 83KBLC format prediction and alignment data
[ ]jp_05RkFMD.concise.fasta2015-04-17 15:37 84KPrediction: coiled-coil, solvent, alignment
[ ]jp_05RkFMD.concise.pdf2015-04-17 15:37 491KPDF prediction and alignment data
[ ]jp_05RkFMD.concise.ps2015-04-17 15:37 8.9MPrediction: coiled-coil, solvent, alignment
[ ]jp_05RkFMD.fasta2015-04-17 15:34 91 Input query sequence in FASTA format
[ ]jp_05RkFMD.full_MSA.fasta2015-04-17 15:37 1.4MFull MSA before JPred filters in FASTA
[TXT]jp_05RkFMD.full_MSA.fasta.noGaps.html2015-04-17 15:37 551KFull MSA before JPred filters in FASTA
[TXT]jp_05RkFMD.full_MSA.fasta.withGaps.html2015-04-17 15:37 5.1MFull MSA before JPred filters in FASTA
[ ]jp_05RkFMD.hmm2015-04-17 15:37 14KHHMer2 profile of the alignment
[TXT]jp_05RkFMD.html2015-04-17 15:37 260KHTML prediction and alignment data
[ ]jp_05RkFMD.input2015-04-17 15:30 84 Raw input data for analysis
[ ]jp_05RkFMD.jalview2015-04-17 15:37 2.4KJalview annotation file for alignment
[ ]jp_05RkFMD.jnet2015-04-17 15:37 2.9KJnet secondary structure output
[TXT]jp_05RkFMD.profile2015-04-17 15:36 13KPSIBLAST profile from alignment
[ ]jp_05RkFMD.pssm2015-04-17 15:37 17KPSIBLAST PSSM for Jnet
[TXT]jp_05RkFMD.results.html2016-02-15 12:18 41KJPred results page
[TXT]jp_05RkFMD.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_05RkFMD.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_05RkFMD.seq2015-04-17 15:30 91 Sequence data file
[TXT]jp_05RkFMD.simple.html2015-04-17 15:37 1.1KBrief HTML: sequence and prediction only
[TXT]jp_05RkFMD.svg.html2015-04-17 15:38 33KJalview SVG summary of results
[ ]jp_05RkFMD.tar.gz2015-04-17 15:38 1.9MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.