JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:21 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1vcla3.name2015-04-17 16:09 0 Job name flag file
[ ]jp_1nF3OQl.align2015-04-17 17:21 2.1KPSIBLAST alignment in FASTA format
[TXT]jp_1nF3OQl.als2015-04-17 17:21 2.9KAlscript command file for PS/PDF output
[ ]jp_1nF3OQl.blast.gz2015-04-17 17:21 4.5KCompressed PSIBLAST output file
[TXT]jp_1nF3OQl.coils.csv2015-04-17 17:21 924 COILS output in CSV format
[ ]jp_1nF3OQl.coilseq.lupas_142015-04-17 17:21 6.3KCOILS output, window length 14
[ ]jp_1nF3OQl.coilseq.lupas_212015-04-17 17:21 6.3KCOILS output, window length 21
[ ]jp_1nF3OQl.coilseq.lupas_282015-04-17 17:21 6.3KCOILS output, window length 28
[ ]jp_1nF3OQl.concise2015-04-17 17:21 10KPrediction: coiled-coil, solvent, alignment
[ ]jp_1nF3OQl.concise.blc2015-04-17 17:21 4.4KBLC format prediction and alignment data
[ ]jp_1nF3OQl.concise.fasta2015-04-17 17:21 3.7KPrediction: coiled-coil, solvent, alignment
[ ]jp_1nF3OQl.concise.pdf2015-04-17 17:21 29KPDF prediction and alignment data
[ ]jp_1nF3OQl.concise.ps2015-04-17 17:21 504KPrediction: coiled-coil, solvent, alignment
[ ]jp_1nF3OQl.fasta2015-04-17 16:34 164 Input query sequence in FASTA format
[ ]jp_1nF3OQl.full_MSA.fasta2015-04-17 17:21 4.7KFull MSA before JPred filters in FASTA
[TXT]jp_1nF3OQl.full_MSA.fasta.noGaps.html2015-04-17 17:21 5.5KFull MSA before JPred filters in FASTA
[TXT]jp_1nF3OQl.full_MSA.fasta.withGaps.html2015-04-17 17:21 19KFull MSA before JPred filters in FASTA
[ ]jp_1nF3OQl.hmm2015-04-17 17:21 28KHHMer2 profile of the alignment
[TXT]jp_1nF3OQl.html2015-04-17 17:21 18KHTML prediction and alignment data
[ ]jp_1nF3OQl.input2015-04-17 16:09 156 Raw input data for analysis
[ ]jp_1nF3OQl.jalview2015-04-17 17:21 3.8KJalview annotation file for alignment
[ ]jp_1nF3OQl.jnet2015-04-17 17:21 5.5KJnet secondary structure output
[TXT]jp_1nF3OQl.profile2015-04-17 17:17 24KPSIBLAST profile from alignment
[ ]jp_1nF3OQl.pssm2015-04-17 17:21 32KPSIBLAST PSSM for Jnet
[TXT]jp_1nF3OQl.results.html2016-02-15 12:18 70KJPred results page
[TXT]jp_1nF3OQl.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_1nF3OQl.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_1nF3OQl.seq2015-04-17 16:09 164 Sequence data file
[TXT]jp_1nF3OQl.simple.html2015-04-17 17:21 1.5KBrief HTML: sequence and prediction only
[TXT]jp_1nF3OQl.svg.html2015-04-17 17:21 62KJalview SVG summary of results
[ ]jp_1nF3OQl.tar.gz2015-04-17 17:21 76KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.