JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:39 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1vlya2.name2015-04-17 17:22 0 Job name flag file
[ ]jp_CGmQKYB.align2015-04-17 18:37 233KPSIBLAST alignment in FASTA format
[TXT]jp_CGmQKYB.als2015-04-17 18:38 3.9KAlscript command file for PS/PDF output
[ ]jp_CGmQKYB.blast.gz2015-04-17 18:35 11MCompressed PSIBLAST output file
[TXT]jp_CGmQKYB.coils.csv2015-04-17 18:38 1.4KCOILS output in CSV format
[ ]jp_CGmQKYB.coilseq.lupas_142015-04-17 18:38 10KCOILS output, window length 14
[ ]jp_CGmQKYB.coilseq.lupas_212015-04-17 18:38 10KCOILS output, window length 21
[ ]jp_CGmQKYB.coilseq.lupas_282015-04-17 18:38 10KCOILS output, window length 28
[ ]jp_CGmQKYB.concise2015-04-17 18:38 461KPrediction: coiled-coil, solvent, alignment
[ ]jp_CGmQKYB.concise.blc2015-04-17 18:38 234KBLC format prediction and alignment data
[ ]jp_CGmQKYB.concise.fasta2015-04-17 18:38 236KPrediction: coiled-coil, solvent, alignment
[ ]jp_CGmQKYB.concise.pdf2015-04-17 18:38 1.6MPDF prediction and alignment data
[ ]jp_CGmQKYB.concise.ps2015-04-17 18:38 29MPrediction: coiled-coil, solvent, alignment
[ ]jp_CGmQKYB.fasta2015-04-17 18:27 257 Input query sequence in FASTA format
[ ]jp_CGmQKYB.full_MSA.fasta2015-04-17 18:37 33MFull MSA before JPred filters in FASTA
[TXT]jp_CGmQKYB.full_MSA.fasta.noGaps.html2015-04-17 18:39 3.0MFull MSA before JPred filters in FASTA
[TXT]jp_CGmQKYB.full_MSA.fasta.withGaps.html2015-04-17 18:39 80MFull MSA before JPred filters in FASTA
[ ]jp_CGmQKYB.hmm2015-04-17 18:37 45KHHMer2 profile of the alignment
[TXT]jp_CGmQKYB.html2015-04-17 18:38 429KHTML prediction and alignment data
[ ]jp_CGmQKYB.input2015-04-17 17:22 248 Raw input data for analysis
[ ]jp_CGmQKYB.jalview2015-04-17 18:38 5.6KJalview annotation file for alignment
[ ]jp_CGmQKYB.jnet2015-04-17 18:37 8.8KJnet secondary structure output
[TXT]jp_CGmQKYB.profile2015-04-17 18:34 39KPSIBLAST profile from alignment
[ ]jp_CGmQKYB.pssm2015-04-17 18:37 52KPSIBLAST PSSM for Jnet
[TXT]jp_CGmQKYB.results.html2016-02-15 12:18 106KJPred results page
[TXT]jp_CGmQKYB.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_CGmQKYB.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_CGmQKYB.seq2015-04-17 17:22 257 Sequence data file
[TXT]jp_CGmQKYB.simple.html2015-04-17 18:38 1.8KBrief HTML: sequence and prediction only
[TXT]jp_CGmQKYB.svg.html2015-04-17 18:39 98KJalview SVG summary of results
[ ]jp_CGmQKYB.tar.gz2015-04-17 18:39 22MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.