JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:41 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1vpba_.name2015-04-17 16:45 0 Job name flag file
[ ]jp_p9WjP1z.align2015-04-17 17:40 380KPSIBLAST alignment in FASTA format
[TXT]jp_p9WjP1z.als2015-04-17 17:40 6.2KAlscript command file for PS/PDF output
[ ]jp_p9WjP1z.blast.gz2015-04-17 17:38 9.8MCompressed PSIBLAST output file
[TXT]jp_p9WjP1z.coils.csv2015-04-17 17:40 2.6KCOILS output in CSV format
[ ]jp_p9WjP1z.coilseq.lupas_142015-04-17 17:40 18KCOILS output, window length 14
[ ]jp_p9WjP1z.coilseq.lupas_212015-04-17 17:40 18KCOILS output, window length 21
[ ]jp_p9WjP1z.coilseq.lupas_282015-04-17 17:40 18KCOILS output, window length 28
[ ]jp_p9WjP1z.concise2015-04-17 17:40 760KPrediction: coiled-coil, solvent, alignment
[ ]jp_p9WjP1z.concise.blc2015-04-17 17:40 381KBLC format prediction and alignment data
[ ]jp_p9WjP1z.concise.fasta2015-04-17 17:40 385KPrediction: coiled-coil, solvent, alignment
[ ]jp_p9WjP1z.concise.pdf2015-04-17 17:41 2.7MPDF prediction and alignment data
[ ]jp_p9WjP1z.concise.ps2015-04-17 17:40 49MPrediction: coiled-coil, solvent, alignment
[ ]jp_p9WjP1z.fasta2015-04-17 17:32 456 Input query sequence in FASTA format
[ ]jp_p9WjP1z.full_MSA.fasta2015-04-17 17:39 17MFull MSA before JPred filters in FASTA
[TXT]jp_p9WjP1z.full_MSA.fasta.noGaps.html2015-04-17 17:41 2.4MFull MSA before JPred filters in FASTA
[TXT]jp_p9WjP1z.full_MSA.fasta.withGaps.html2015-04-17 17:41 61MFull MSA before JPred filters in FASTA
[ ]jp_p9WjP1z.hmm2015-04-17 17:40 82KHHMer2 profile of the alignment
[TXT]jp_p9WjP1z.html2015-04-17 17:40 579KHTML prediction and alignment data
[ ]jp_p9WjP1z.input2015-04-17 16:45 444 Raw input data for analysis
[ ]jp_p9WjP1z.jalview2015-04-17 17:40 9.6KJalview annotation file for alignment
[ ]jp_p9WjP1z.jnet2015-04-17 17:40 16KJnet secondary structure output
[TXT]jp_p9WjP1z.profile2015-04-17 17:36 70KPSIBLAST profile from alignment
[ ]jp_p9WjP1z.pssm2015-04-17 17:40 94KPSIBLAST PSSM for Jnet
[TXT]jp_p9WjP1z.results.html2016-02-15 12:18 184KJPred results page
[TXT]jp_p9WjP1z.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_p9WjP1z.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_p9WjP1z.seq2015-04-17 16:45 456 Sequence data file
[TXT]jp_p9WjP1z.simple.html2015-04-17 17:40 2.5KBrief HTML: sequence and prediction only
[TXT]jp_p9WjP1z.svg.html2015-04-17 17:41 176KJalview SVG summary of results
[ ]jp_p9WjP1z.tar.gz2015-04-17 17:41 20MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.