JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]d1vq811.name2015-04-17 19:14 0 Job name flag file
[ ]jp_fbhaduE.input2015-04-17 19:14 63 Raw input data for analysis
[ ]jp_fbhaduE.fasta2015-04-17 21:39 69 Input query sequence in FASTA format
[ ]jp_fbhaduE.seq2015-04-17 19:14 69 Sequence data file
[TXT]jp_fbhaduE.coils.csv2015-04-17 21:42 366 COILS output in CSV format
[TXT]jp_fbhaduE.simple.html2015-04-17 21:42 1.0KBrief HTML: sequence and prediction only
[TXT]jp_fbhaduE.als2015-04-17 21:42 1.6KAlscript command file for PS/PDF output
[ ]jp_fbhaduE.jalview2015-04-17 21:42 1.9KJalview annotation file for alignment
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[ ]jp_fbhaduE.jnet2015-04-17 21:42 2.1KJnet secondary structure output
[ ]jp_fbhaduE.coilseq.lupas_142015-04-17 21:42 2.4KCOILS output, window length 14
[ ]jp_fbhaduE.coilseq.lupas_212015-04-17 21:42 2.4KCOILS output, window length 21
[ ]jp_fbhaduE.coilseq.lupas_282015-04-17 21:42 2.4KCOILS output, window length 28
[TXT]LOG2015-04-17 21:42 4.7KJPred server log file
[TXT]jp_fbhaduE.profile2015-04-17 21:41 9.4KPSIBLAST profile from alignment
[ ]jp_fbhaduE.hmm2015-04-17 21:42 11KHHMer2 profile of the alignment
[ ]jp_fbhaduE.pssm2015-04-17 21:42 12KPSIBLAST PSSM for Jnet
[TXT]jp_fbhaduE.results_jalview.html2016-02-24 17:17 13KJalview results options
[ ]jp_fbhaduE.align2015-04-17 21:42 14KPSIBLAST alignment in FASTA format
[ ]jp_fbhaduE.concise.fasta2015-04-17 21:42 14KPrediction: coiled-coil, solvent, alignment
[ ]jp_fbhaduE.concise.blc2015-04-17 21:42 14KBLC format prediction and alignment data
[TXT]jp_fbhaduE.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[TXT]jp_fbhaduE.svg.html2015-04-17 21:42 25KJalview SVG summary of results
[ ]jp_fbhaduE.concise2015-04-17 21:42 27KPrediction: coiled-coil, solvent, alignment
[TXT]jp_fbhaduE.results.html2016-02-15 12:18 33KJPred results page
[TXT]jp_fbhaduE.html2015-04-17 21:42 54KHTML prediction and alignment data
[ ]jp_fbhaduE.concise.pdf2015-04-17 21:42 66KPDF prediction and alignment data
[ ]jp_fbhaduE.blast.gz2015-04-17 21:42 75KCompressed PSIBLAST output file
[ ]jp_fbhaduE.full_MSA.fasta2015-04-17 21:42 92KFull MSA before JPred filters in FASTA
[TXT]jp_fbhaduE.full_MSA.fasta.noGaps.html2015-04-17 21:42 98KFull MSA before JPred filters in FASTA
[ ]jp_fbhaduE.tar.gz2015-04-17 21:42 216KArchive containing complete results
[TXT]jp_fbhaduE.full_MSA.fasta.withGaps.html2015-04-17 21:42 292KFull MSA before JPred filters in FASTA
[ ]jp_fbhaduE.concise.ps2015-04-17 21:42 1.3MPrediction: coiled-coil, solvent, alignment
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.